ggKbase home page

SCNpilot_cont_1000_bf_scaffold_361_curated_13

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(13046..13534)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000347EA72 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 162.0
  • Bit_score: 322
  • Evalue 2.40e-85
AsnC family transcriptional regulator {ECO:0000313|EMBL:AJE98081.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 162.0
  • Bit_score: 314
  • Evalue 1.20e-82
Transcriptional regulator, AsnC family protein; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 163.0
  • Bit_score: 225
  • Evalue 1.60e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pandoraea apista → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
GTGCCAAAACTCGAACTGGACAAAATCGATCGCCGCATTCTCGCCTTGCTTCAAAGCAATGGCCGGCTGTCCAATCTCGAAATCGCAGAGCAGGTGAGACTCTCGCCGAGCCCATGCCTGCGACGCATTCGTCGCCTGGAGGAAGCGGGCGTCATTCGCGGCTATGTCGCCTTGCTGGAGCCCACGCGCATCGGCCTCGGCCTGCTGGCCTACGTCAATGTACGGCTAGACAAGCGCCATCCTGGCGATGGGCAGGGTGGCTCGGTCATCGAACACTTCCGCGCCGTGGTCGATACCTGGACGGAGGTCGTCGGCTGCTATGCGATGGCTGGCGACATGGACTACCTGCTGCGCGTGCACGTGCGCGACATGGCGCACTTCTCGCGCTTCATGCAGGCGCAGTTGCTCGTGCATCCGAGCGTGGTCGACGTCAAAACGAGCTTCGTCCTCGATCAGCTCAAGGAGACGACAGCGCTGCCGCTTCCGTAA
PROTEIN sequence
Length: 163
VPKLELDKIDRRILALLQSNGRLSNLEIAEQVRLSPSPCLRRIRRLEEAGVIRGYVALLEPTRIGLGLLAYVNVRLDKRHPGDGQGGSVIEHFRAVVDTWTEVVGCYAMAGDMDYLLRVHVRDMAHFSRFMQAQLLVHPSVVDVKTSFVLDQLKETTALPLP*