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SCNpilot_cont_1000_bf_scaffold_361_curated_28

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(32401..34050)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase RhlE {ECO:0000256|HAMAP-Rule:MF_00968}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00968};; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 552.0
  • Bit_score: 947
  • Evalue 9.30e-273
DEAD/DEAH box helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 544.0
  • Bit_score: 656
  • Evalue 7.40e-186
ATP-dependent RNA helicase RhlE n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WWZ3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 552.0
  • Bit_score: 947
  • Evalue 6.60e-273

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Taxonomy

Pandoraea sp. SD6-2 → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1650
ATGTCTTTTGAAAAGCTCGGCCTGTCGGCCGACATCCTGCGTGCCGTGGCCGACCTTGGCTACACGCACCCGACGCCCATTCAACTGCAAGCGATTCCGGCCGTCCTGCAAGGCGGCGATCTCCTCGCCGGTGCCCAGACCGGGACCGGCAAGACGGCGGGCTTCACGCTGCCTATCCTGCAAATGCTCTCCACGCGTGCGCGCGCGGCGGCGGCCAACGGCAAGCGCTCCGTGCGCGCGCTCGTGCTGACGCCCACGCGCGAGTTGGCCGCCCAGGTCGAGGAAAGCGTTACGCAATACGGCAAGTACCTGCCGCTCACGTCCATGACCGTGTTCGGCGGCGTGTCGATGGTGCCGCAGGTCAAACAATTGGCGCGCGGCGTGGACATTCTCGTCGCGACCCCTGGCCGTCTGCTCGATCACATGCAGCAGAAAACGGTCGATCTTTCTGGCGTCGAGATTCTCGTGCTGGACGAAGCCGACCGCATGCTCGACATGGGCTTCATTCGCGATATTCGTCGTGTGCTGGCGGTGCTGCCGTCGAAGCGCCAGAACCTGCTGTTCTCGGCCACGTTCTCCGACGAGATCAAGCAACTGGCCGACGGCCTGCTCAAGTCGCCCGCGCTCATCGAAGTGGCGCGTCGCAACACGACGGCGGAAACCGTCGCGCAGAAGATCCACCCGGTCGATCGCGACCGTAAGCGCGAGCTGCTCGAACACCTCGTGCGCGAGCACAACTGGTTCCAGGTGCTCGTGTTCACGCGCACCAAGCACGGCGCGAACCGGCTCGCCGAGCAGCTCACGAAGGGCGGCATTCCGGCGCTCGCCATTCACGGTAACAAGAGTCAGGGCGCCCGCACGCGAGCGCTCGCCGAATTCAAGAGCGGCACATTGCAGGTGCTGGTTGCGACCGATATTGCCGCGCGCGGCATCGACATCGACCAGTTGCCCCACGTGGTCAACTTCGACCTGCCGGAAGTGGCGGAGGACTATGTCCACCGCATCGGCCGCACCGGACGCGCCGGCGCAAACGGCGAGGCCGTGTCGCTTGTGTGCGTGGACGAGCATCAACTGCTCACGCAGATCGAACGTCTCATCAAGCGCACGATCGATCGCGAAGTGATCCCGGGCTTCGATCCGGATCCGCATGCCGTGGCGCAACCGATTCGCAAGGCGCAACAAGGCCGTGGGGCCGGTGGTGGACGGGGCGGGCGCGGCGGCGACGACGACGACGCGCGCCAACCGGCCCGCGCCCCGCGTGAAGCGCGTGAGCCGCGCGATGGCGGTCGTGGCGCACGCCAGGGCAACGAGCCGAAGGCGCGTCGCGAAGGCGAGCGCGGTGGCCGAAAGAACAGCAGTGCCGTGAACGGCGGAAATGCGGGGCACGGCGCGCAGGTCGCGAACGCGGGACAAGGCGGGCAGCAACGCCATCAGGCGCAGGCGCCCAAGCGTCAGGGCGATGCCCAACGCGCGGCCACACCGGCGGCCGGTGCAGCACGCCAAGGTCGTGACGGCCGCACGGGGCAGACCGCCTCGCGCGGGCAAGGAGGCGGCGCGGAGCGCAGCGATTTCGCACAGCGCGCGCCGCGTCCGGCGCGTCGCGACGCGGTTGGCGGCGCCTTGCTGATGGGCAAGGCAAAACGCGACTGA
PROTEIN sequence
Length: 550
MSFEKLGLSADILRAVADLGYTHPTPIQLQAIPAVLQGGDLLAGAQTGTGKTAGFTLPILQMLSTRARAAAANGKRSVRALVLTPTRELAAQVEESVTQYGKYLPLTSMTVFGGVSMVPQVKQLARGVDILVATPGRLLDHMQQKTVDLSGVEILVLDEADRMLDMGFIRDIRRVLAVLPSKRQNLLFSATFSDEIKQLADGLLKSPALIEVARRNTTAETVAQKIHPVDRDRKRELLEHLVREHNWFQVLVFTRTKHGANRLAEQLTKGGIPALAIHGNKSQGARTRALAEFKSGTLQVLVATDIAARGIDIDQLPHVVNFDLPEVAEDYVHRIGRTGRAGANGEAVSLVCVDEHQLLTQIERLIKRTIDREVIPGFDPDPHAVAQPIRKAQQGRGAGGGRGGRGGDDDDARQPARAPREAREPRDGGRGARQGNEPKARREGERGGRKNSSAVNGGNAGHGAQVANAGQGGQQRHQAQAPKRQGDAQRAATPAAGAARQGRDGRTGQTASRGQGGGAERSDFAQRAPRPARRDAVGGALLMGKAKRD*