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SCNpilot_cont_1000_bf_scaffold_262_curated_25

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 21002..21652

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A6239 similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 216.0
  • Bit_score: 413
  • Evalue 1.80e-112
Type III secretion system protein SsaR {ECO:0000313|EMBL:AJE98935.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 216.0
  • Bit_score: 397
  • Evalue 1.40e-107
epaP; type III secretion apparatus protein, YscR/HrcR family similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 215.0
  • Bit_score: 295
  • Evalue 1.00e-77

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Taxonomy

Pandoraea apista → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGTCCCTGCTCGACCACCCGGTGCAGCTCGTCGTCGTACTGTCGCTGCTCTCGATCATGCCGTTGCTGGTGGTGCTGGGAACCGCGTTTCTGAAGCTGGCGGTCGTGTTCGCCCTGTTGCGCAATGCGCTCGGCACGCAGCAGATTCCGCCCAACATCGCGATTTACGGCTTATCGCTCGTGCTCACCTGCTTCATCATGGCCCCGGTGGCCTTCGACATCGAGGCCAATCTCGAGACGCGTCCGGTATCGCTGTCGTCGAAGGATTTCGTGGCCGATGTCGATGCGAGCGTCCTTTCGCCCTACCGTGCATTTCTCACCCGTCACACCGACGCGAGACAACGCGACTTCTTCGCCAGCGTCGGCCGAGATACCTGGCCGGAGGCGCATCGCGACCGCCTGGGCAGCGACTCGCTGCTCGTCCTGATGCCGGCGTTCGCGCTGAGCCAACTCGCCGAAGCGTTCAAGATCGGGCTGCTGCTGTACCTGCCGTTTGTTGTGATCGACCTGGTGATCTCGAACATCCTGCTCGCGATGGGCATGATGATGGTCTCGCCCATGACCATTGCTCTCCCGTTCAAGTTACTGATCTTCGTCATGATGAACGGTTGGGAGCAGTTGGTGCGCCAGTTGATGCTCTCCTACGCATGA
PROTEIN sequence
Length: 217
MSLLDHPVQLVVVLSLLSIMPLLVVLGTAFLKLAVVFALLRNALGTQQIPPNIAIYGLSLVLTCFIMAPVAFDIEANLETRPVSLSSKDFVADVDASVLSPYRAFLTRHTDARQRDFFASVGRDTWPEAHRDRLGSDSLLVLMPAFALSQLAEAFKIGLLLYLPFVVIDLVISNILLAMGMMMVSPMTIALPFKLLIFVMMNGWEQLVRQLMLSYA*