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SCNpilot_cont_1000_bf_scaffold_262_curated_26

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 21672..21938

Top 3 Functional Annotations

Value Algorithm Source
type III secretion system protein SsaS n=1 Tax=Pandoraea sp. B-6 RepID=UPI000346404F similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 88.0
  • Bit_score: 167
  • Evalue 5.30e-39
Type III secretion system protein SsaS {ECO:0000313|EMBL:KHQ94398.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 88.0
  • Bit_score: 164
  • Evalue 6.30e-38
escS; type III secretion apparatus protein EscS; K03227 type III secretion protein SctS similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 88.0
  • Bit_score: 131
  • Evalue 1.70e-28

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Taxonomy

Pandoraea pnomenusa → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGAGTGAAGCCATCGTCGTCAATCTCACGAGCGAGATGCTTTGGCTTACGCTCCTCCTGTCGCTGCCCACCGTGGTGGTGGCGGCGGCGGTCGGCGTGCTGGTCTCGCTGGTCCAGGCGCTTACGCAGGTGCAGGATCAGACCGTGCAGTTCCTCATCAAGCTCATTGCGGTATCGGTCACGTTGGCCGCCACCTATGCGTGGATGGGCCATGTGCTGCTGCATTACGCGGGTAACGCGTTCGAGCAGATCAGCCGGATGCGGTGA
PROTEIN sequence
Length: 89
MSEAIVVNLTSEMLWLTLLLSLPTVVVAAAVGVLVSLVQALTQVQDQTVQFLIKLIAVSVTLAATYAWMGHVLLHYAGNAFEQISRMR*