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SCNpilot_cont_1000_bf_scaffold_168_curated_4

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(3503..3775)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034724BD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 90.0
  • Bit_score: 174
  • Evalue 4.50e-41
Transcriptional regulator HU subunit alpha {ECO:0000313|EMBL:KHS00660.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 90.0
  • Bit_score: 165
  • Evalue 5.00e-38
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 90.0
  • Bit_score: 151
  • Evalue 1.70e-34

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Taxonomy

Pandoraea pnomenusa → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
GTGAACAAGACGGAACTGATCGATCATATCGCGGGTGAAGCAGACATCTCGAAAGCGGCTGCCGGTCGGGCACTTGAAGCATTGGTGGGTGCGGTAAAAAAATCGCTTAAGAAGGGAGACAGCGTGACGTTGGTCGGCTTCGGCACCTTCCTCGTGGCCAAGCGTGCGGCGCGTACCGGACGCAATCCGCGCACGGGGGCCGCGATCAAGATCAAGGCAGCGAAGGTTCCGAAATTTCGCCCTGGCAAAGTATTGAAAGATACGTTAAACTAA
PROTEIN sequence
Length: 91
VNKTELIDHIAGEADISKAAAGRALEALVGAVKKSLKKGDSVTLVGFGTFLVAKRAARTGRNPRTGAAIKIKAAKVPKFRPGKVLKDTLN*