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SCNpilot_cont_1000_bf_scaffold_168_curated

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Displaying items 1-30 of 551 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_168_curated_1
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51..515)
DNA (465bp) protein (155aa)
ABC transporter n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D11B0
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AJC22531.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
ABC transporter; K02003 putative ABC transport system ATP-binding protein
SCNpilot_cont_1000_bf_scaffold_168_curated_2
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

568..1215
DNA (648bp) protein (216aa)
arylesterase (EC:3.1.1.2); K10804 acyl-CoA thioesterase I [EC:3.1.2.- 3.1.1.5]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B7B3C
Arylesterase {ECO:0000313|EMBL:AJF00131.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
SCNpilot_cont_1000_bf_scaffold_168_curated_3
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1275..3197)
DNA (1923bp) protein (641aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
PpiC-type peptidyl-prolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003459121
SCNpilot_cont_1000_bf_scaffold_168_curated_trna_12
unknown

Not on your lists

comp(3283..3356)
DNA (74bp)
transferRNA
SCNpilot_cont_1000_bf_scaffold_168_curated_trna_11
unknown

Not on your lists

comp(3374..3446)
DNA (73bp)
transferRNA
SCNpilot_cont_1000_bf_scaffold_168_curated_4
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3503..3775)
DNA (273bp) protein (91aa)
transcriptional regulator n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034724BD
Transcriptional regulator HU subunit alpha {ECO:0000313|EMBL:KHS00660.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta
SCNpilot_cont_1000_bf_scaffold_168_curated_5
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4078..6498)
DNA (2421bp) protein (807aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
lon; ATP-dependent protease (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] rbh
peptidase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A9554
SCNpilot_cont_1000_bf_scaffold_168_curated_6
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6695..7975)
DNA (1281bp) protein (427aa)
ATP-dependent protease n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B2B8F
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX
SCNpilot_cont_1000_bf_scaffold_168_curated_7
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8212..8868)
DNA (657bp) protein (219aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
Clp protease proteolytic subunit ClpP n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C99BA
SCNpilot_cont_1000_bf_scaffold_168_curated_8
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8992..10332)
DNA (1341bp) protein (447aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
trigger factor n=1 Tax=Pandoraea sp. B-6 RepID=UPI000345B3E1
trigger factor; K03545 trigger factor
SCNpilot_cont_1000_bf_scaffold_168_curated_9
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10776..11606
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034ABFAB
TetR family transcriptional regulator {ECO:0000313|EMBL:AJC16909.1}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
TetR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_168_curated_10
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11786..14287
DNA (2502bp) protein (834aa)
fadE; acyl-CoA dehydrogenase; K06445 acyl-CoA dehydrogenase [EC:1.3.99.-]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000345AB5F
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AJF00136.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
SCNpilot_cont_1000_bf_scaffold_168_curated_11
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14333..15784
DNA (1452bp) protein (484aa)
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:KHS00666.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KHS00666.1};; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
fabG; 3-ketoacyl-(acyl-carrier-protein) reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-ketoacyl-ACP reductase n=2 Tax=Pandoraea RepID=V5UL23_9BURK
SCNpilot_cont_1000_bf_scaffold_168_curated_12
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15781..16734
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000346E691
Uncharacterized protein {ECO:0000313|EMBL:AJZ74892.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
MaoC domain-containing protein dehydratase
SCNpilot_cont_1000_bf_scaffold_168_curated_13
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16731..18050
DNA (1320bp) protein (440aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EON11533.1}; EC=2.3.1.9 {ECO:0000313|EMBL:EON11533.1};; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
acetyl-CoA acetyltransferase (EC:2.3.1.16); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
acetyl-CoA acetyltransferase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B3674
SCNpilot_cont_1000_bf_scaffold_168_curated_14
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18168..19883
DNA (1716bp) protein (572aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D19F0
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EON11534.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
long-chain acyl-CoA synthetase
SCNpilot_cont_1000_bf_scaffold_168_curated_15
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19898..20896
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003490A3E
Uncharacterized protein {ECO:0000313|EMBL:EON11535.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
lipoprotein
SCNpilot_cont_1000_bf_scaffold_168_curated_16
Pandoraea vervacti, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21081..21335)
DNA (255bp) protein (85aa)
cell division topological specificity factor MinE n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034DA4F7
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=656178 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea vervacti.;"
cell division topological specificity factor MinE; K03608 cell division topological specificity factor
SCNpilot_cont_1000_bf_scaffold_168_curated_17
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21345..22160)
DNA (816bp) protein (272aa)
cell division inhibitor MinD n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034560F2
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
septum site-determining protein MinD; K03609 septum site-determining protein MinD
SCNpilot_cont_1000_bf_scaffold_168_curated_18
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22204..22956)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034DF49C
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
minC; septum site-determining protein MinC
SCNpilot_cont_1000_bf_scaffold_168_curated_19
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23306..23494
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D2EB8
Uncharacterized protein {ECO:0000313|EMBL:AJF00141.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_168_curated_20
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23594..23743)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PYJ9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:AHB08417.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
SCNpilot_cont_1000_bf_scaffold_168_curated_21
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23966..24679)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A65E7
Short-chain dehydrogenase {ECO:0000313|EMBL:AJF00143.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
short chain dehydrogenase
SCNpilot_cont_1000_bf_scaffold_168_curated_22
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24864..25769
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000346026F
LysR family transcriptional regulator {ECO:0000313|EMBL:KHQ92801.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_1000_bf_scaffold_168_curated_23
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25830..26432)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B40B7
TetR family transcriptional regulator {ECO:0000313|EMBL:EON11543.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
TetR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_168_curated_24
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26657..27361
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034866DE
Short-chain dehydrogenase {ECO:0000313|EMBL:KHQ95027.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
short chain dehydrogenase
SCNpilot_cont_1000_bf_scaffold_168_curated_25
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27458..28381)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003470C3C
Recombination-associated protein RdgC {ECO:0000256|HAMAP-Rule:MF_00194, ECO:0000256|SAAS:SAAS00073315}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
rdgC; recombination associated protein; K03554 recombination associated protein RdgC
SCNpilot_cont_1000_bf_scaffold_168_curated_26
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28454..28921)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000345CC41
Uncharacterized protein {ECO:0000313|EMBL:AJC16897.1}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_168_curated_27
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28940..31177)
DNA (2238bp) protein (746aa)
mdlB; multidrug ABC transporter ATPase/permease (EC:3.6.3.-); K06147 ATP-binding cassette, subfamily B, bacterial
ABC transporter n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QM60_RALPI
ABC transporter transmembrane region:ABC transporter related protein {ECO:0000313|EMBL:EON11547.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_1000_bf_scaffold_168_curated_28
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31454..34105
DNA (2652bp) protein (884aa)
cyanophycin synthetase (EC:6.3.2.-); K03802 cyanophycin synthetase [EC:6.-.-.-]
cyanophycin synthetase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D10D3
Cyanophycin synthetase {ECO:0000313|EMBL:EON11548.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
Displaying items 1-30 of 551 in total

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