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SCNpilot_cont_1000_bf_scaffold_168_curated_25

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(27458..28381)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003470C3C similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 307.0
  • Bit_score: 614
  • Evalue 7.50e-173
Recombination-associated protein RdgC {ECO:0000256|HAMAP-Rule:MF_00194, ECO:0000256|SAAS:SAAS00073315}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 305.0
  • Bit_score: 581
  • Evalue 5.80e-163
rdgC; recombination associated protein; K03554 recombination associated protein RdgC similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 298.0
  • Bit_score: 424
  • Evalue 2.60e-116

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Taxonomy

Pandoraea sp. SD6-2 → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGCCGATGTGGTTCAAGAATCTTCAGTTGCACCGAATTCCTGCCGGTTGGTCCATGAGCGTCGCGCAAATGGAAACGGCATTGGAGAAGCACGCCTTCTGCGAAGGCGGTAGCCTCGAAATGCAAGTGCAGGGCTGGGCGCCGCCGCGTGAGGGGGGCGAACTGGTGCACAGCATCAACCGTCAGTTTCTGCTCGCCTATCGTGCCGAGAAGAAGCTGCTGCCGTCCACCGTCGTGAATCAGGTCACGCGCGCCAAGGCGGTCGAGTTGGAAGAGCAGCAAGGCTTCAAGCCGGGCCGCAAGCAGATGCGTGAGCTCAAGGAGCAGGTCACCGACGAACTGCTGCCGCGTGCATTCGGCATTCGCCGCGACACGCGCGTGTGGATCGACCCGGCCAATCGCTGGCTCGTGATCGACGCCGCGTCGCCCGCCAAGGCCGACGAAGTGCGCAGCCTGCTCCTCAAGACGCTCGACATCACGCTCGAGAACGTGGAACTCAACGAGGCGCCCGTGGCAATGATGACCTCGTGGCTCGCGGGCAATGACGCGCCGGGCGGCTTCACCGTCGACCAGGACGTGGAGTTGCGCTCGAATACCGACGAGAAGGCGGCAGTGCGCTATGTGCGCCACCCACTCGACGGGGCGGACGTGCGTCAGCATATCGAGGCTGGCAAGCGCTGCACCAGGCTGGCGATGACGTGGAACGACCGGATCTCCTTCGTGCTGACCGACGCTTTCGTCATCAAACGTGTGACGCCGCTCGACGTCATCAAGGATGCCGCCGATCCGACGGCCGAAGGCGAAGCCGAGAAGTTCGACGCCGACATCGCGCTCATGACCGGTGAGCTCGCCCGCATGCTCGACGATCTGGTCGAGGCGCTGGGCGGCGAGCGTCAAATGGGTCAGATGGACAAGGCCGCCTGA
PROTEIN sequence
Length: 308
MPMWFKNLQLHRIPAGWSMSVAQMETALEKHAFCEGGSLEMQVQGWAPPREGGELVHSINRQFLLAYRAEKKLLPSTVVNQVTRAKAVELEEQQGFKPGRKQMRELKEQVTDELLPRAFGIRRDTRVWIDPANRWLVIDAASPAKADEVRSLLLKTLDITLENVELNEAPVAMMTSWLAGNDAPGGFTVDQDVELRSNTDEKAAVRYVRHPLDGADVRQHIEAGKRCTRLAMTWNDRISFVLTDAFVIKRVTPLDVIKDAADPTAEGEAEKFDADIALMTGELARMLDDLVEALGGERQMGQMDKAA*