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SCNpilot_cont_1000_bf_scaffold_168_curated_7

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(8212..8868)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 217.0
  • Bit_score: 407
  • Evalue 1.10e-110
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 216.0
  • Bit_score: 340
  • Evalue 4.70e-91
Clp protease proteolytic subunit ClpP n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C99BA similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 218.0
  • Bit_score: 419
  • Evalue 1.90e-114

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Taxonomy

Pandoraea sputorum → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGATTACCCGTTCCGAATTGCTCGCCCAACTCGCCTCCCCGACGTACAACTCCGCACTCGAGACGCAAGGCCTTGGCCTCGTGCCGATGGTCGTCGAGCAAAGTGGTCGTGGCGAGCGCGCTTACGATATTTACTCGCGACTCCTCAAGGAGCGCATCATTTTCCTGGTGGGCGAGGTCAACGACCAGAGCGCCAACCTCGTCGTCGCACAGTTGCTGTTCCTCGAGAGCGAAAATCCGGACAAGGAAATCTCGATGTACATCAATTCGCCGGGCGGTTCCGTCTCGGCGGGCCTGGCGATTTACGACACGATGAAGTTCGTCAAGCCGGCGGTCTCGACGCTGTGCCTGGGCATGGCGGCGAGCATGGGCGCATTTCTGCTGGCGGCCGGTGAGAAGGGCAAGCGCTTCGCGCTGCCGAACGCGCGCATCATGATTCACCAACCGCTGGGCGGCGCTCGCGGTCAGGCGTCGGACATCGAGATCCACGCCAGGGAAATCCTGCTGCTCAAGGATCGGTTGAATCGACTGTTGGCCGACAACACCGGCCAGTCGCTCGAGGTCATCGCGCGCGACACCGATCGCGACAACTTCAAGTCGGCGGCCGATGCCGTCGAGTATGGGTTGATCGACCGCGTGCTCGAAAAGCGTCCCTGA
PROTEIN sequence
Length: 219
MITRSELLAQLASPTYNSALETQGLGLVPMVVEQSGRGERAYDIYSRLLKERIIFLVGEVNDQSANLVVAQLLFLESENPDKEISMYINSPGGSVSAGLAIYDTMKFVKPAVSTLCLGMAASMGAFLLAAGEKGKRFALPNARIMIHQPLGGARGQASDIEIHAREILLLKDRLNRLLADNTGQSLEVIARDTDRDNFKSAADAVEYGLIDRVLEKRP*