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SCNpilot_cont_1000_bf_scaffold_168_curated

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Displaying items 61-90 of 551 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_168_curated_58
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68124..71588
DNA (3465bp) protein (1155aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
helicase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00038284D6
SCNpilot_cont_1000_bf_scaffold_168_curated_59
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71746..72963
DNA (1218bp) protein (406aa)
Acetylornithine deacetylase {ECO:0000256|SAAS:SAAS00063950}; EC=3.5.1.16 {ECO:0000256|SAAS:SAAS00063953};; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
acetylornithine deacetylase (EC:3.5.1.16); K01438 acetylornithine deacetylase [EC:3.5.1.16]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034AD716
SCNpilot_cont_1000_bf_scaffold_168_curated_60
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73154..74440
DNA (1287bp) protein (429aa)
membrane protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034AB83C
Membrane protein {ECO:0000313|EMBL:KHQ98383.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
MFS permease; K03762 MFS transporter, MHS family, proline/betaine transporter
SCNpilot_cont_1000_bf_scaffold_168_curated_61
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74482..75570
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034BAE6D
Pyridoxal-5'-phosphate-dependent protein subunit beta {ECO:0000313|EMBL:KHQ94450.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
tdcB; pyridoxal-5'-phosphate-dependent protein beta subunit
SCNpilot_cont_1000_bf_scaffold_168_curated_62
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75696..76721
DNA (1026bp) protein (342aa)
ornithine cyclodeaminase (EC:4.3.1.12); K01750 ornithine cyclodeaminase [EC:4.3.1.12]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034BE9DC
Uncharacterized protein {ECO:0000313|EMBL:KHQ98381.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_cont_1000_bf_scaffold_168_curated_63
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76881..77447
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034DD52A
Hydrolase {ECO:0000313|EMBL:KHQ98380.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
isochorismatase hydrolase
SCNpilot_cont_1000_bf_scaffold_168_curated_64
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77506..78522
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003491F5F
AraC family transcriptional regulator {ECO:0000313|EMBL:AJF00217.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
AraC family transcriptional regulator protein
SCNpilot_cont_1000_bf_scaffold_168_curated_65
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78657..79553
DNA (897bp) protein (299aa)
phosphoserine phosphatase SerB (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034728C0
Phosphoserine phosphatase SerB {ECO:0000313|EMBL:EON10689.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_1000_bf_scaffold_168_curated_66
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79612..80829)
DNA (1218bp) protein (406aa)
Cystathionine beta-lyase {ECO:0000313|EMBL:KHQ98378.1}; EC=4.4.1.8 {ECO:0000313|EMBL:KHQ98378.1};; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
cystathionine beta-lyase; K01760 cystathionine beta-lyase [EC:4.4.1.8]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034780E9
SCNpilot_cont_1000_bf_scaffold_168_curated_67
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80882..82063)
DNA (1182bp) protein (394aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AJC16858.1}; EC=2.3.1.9 {ECO:0000313|EMBL:AJC16858.1};; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
beta-ketothiolase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
3-ketoacyl-CoA thiolase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034CD86A
SCNpilot_cont_1000_bf_scaffold_168_curated_68
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82320..83258)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003493350
2-dehydro-3-deoxygluconokinase {ECO:0000313|EMBL:AJC22609.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
ribokinase-like domain-containing protein
SCNpilot_cont_1000_bf_scaffold_168_curated_69
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83258..84625)
DNA (1368bp) protein (456aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1380774 species="Bacteria; Pr
ribosomal protein S12 methylthiotransferase; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-]
ribosomal protein S12 methylthiotransferase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D29EB
SCNpilot_cont_1000_bf_scaffold_168_curated_70
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84882..85457)
DNA (576bp) protein (192aa)
polyhydroxyalkanoate synthesis repressor PhaR n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034752C4
Polyhydroxyalkanoate synthesis repressor PhaR {ECO:0000313|EMBL:AIU25793.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
polyhydroxyalkonate synthesis repressor, PhaR
SCNpilot_cont_1000_bf_scaffold_168_curated_71
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85622..86362)
DNA (741bp) protein (247aa)
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:KHQ94459.1}; EC=1.1.1.36 {ECO:0000313|EMBL:KHQ94459.1};; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
acetyacetyl-CoA reductase; K00023 acetoacetyl-CoA reductase [EC:1.1.1.36]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000371619E
SCNpilot_cont_1000_bf_scaffold_168_curated_72
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86544..87725)
DNA (1182bp) protein (394aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AKC71079.1}; EC=2.3.1.9 {ECO:0000313|EMBL:AKC71079.1};; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
acetyl-CoA acetyltransferase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034CA2B3
SCNpilot_cont_1000_bf_scaffold_168_curated_73
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87787..89637)
DNA (1851bp) protein (617aa)
poly(R)-hydroxyalkanoic acid synthase; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000345F743
Poly(R)-hydroxyalkanoic acid synthase {ECO:0000313|EMBL:EON10679.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_1000_bf_scaffold_168_curated_74
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90112..90903)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003492A5D
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
hypothetical protein; K05810 conserved hypothetical protein
SCNpilot_cont_1000_bf_scaffold_168_curated_75
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90914..92074)
DNA (1161bp) protein (387aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Pseudouridine synthase n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WTW0_9BURK
SCNpilot_cont_1000_bf_scaffold_168_curated_76
Pandoraea vervacti, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92096..92920
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000381D5B0
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=656178 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea vervacti.;"
outer membrane assembly lipoprotein YfiO; K05807 putative lipoprotein
SCNpilot_cont_1000_bf_scaffold_168_curated_77
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93035..95293)
DNA (2259bp) protein (753aa)
putative ATP-dependent DNA helicase-related protein; K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00035DD50D
Helicase {ECO:0000313|EMBL:KHQ94578.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_cont_1000_bf_scaffold_168_curated_78
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95379..95582)
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034CF7C0
Uncharacterized protein {ECO:0000313|EMBL:EON10672.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_168_curated_79
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95628..96539)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00035C49E0
Uncharacterized protein {ECO:0000313|EMBL:EON10671.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_168_curated_80
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96612..98963
DNA (2352bp) protein (784aa)
RNA-binding protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003499760
RNA-binding protein {ECO:0000313|EMBL:AHB05661.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
RNA-binding S1 domain-containing protein; K06959 uncharacterized protein
SCNpilot_cont_1000_bf_scaffold_168_curated_81
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99202..101094)
DNA (1893bp) protein (631aa)
potassium transporter Kup n=1 Tax=Pandoraea sp. B-6 RepID=UPI000348E205
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
Kup system potassium uptake protein; K03549 KUP system potassium uptake protein
SCNpilot_cont_1000_bf_scaffold_168_curated_82
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101509..102240)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034DF0F8
Uncharacterized protein {ECO:0000313|EMBL:AKC71088.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
putative lipoprotein
SCNpilot_cont_1000_bf_scaffold_168_curated_83
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102680..104095)
DNA (1416bp) protein (472aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A325D
Fis family transcriptional regulator {ECO:0000313|EMBL:KHQ94468.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
Fis family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_168_curated_84
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104226..106274)
DNA (2049bp) protein (683aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A1C72
Uncharacterized protein {ECO:0000313|EMBL:AJC22621.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_168_curated_85
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(106317..106859)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WX10_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EON10665.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_168_curated_86
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(106933..107835)
DNA (903bp) protein (301aa)
Flp pilus assembly protein, contains TPR repeats (EC:2.4.1.-)
Flp pilus assembly protein n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WTV7_9BURK
Flp pilus assembly protein {ECO:0000313|EMBL:EON10664.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_1000_bf_scaffold_168_curated_87
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107916..108935)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003457807
Membrane protein {ECO:0000313|EMBL:AHB78280.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
type II secretion system protein
Displaying items 61-90 of 551 in total

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