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SCNpilot_cont_1000_bf_scaffold_168_curated_80

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 96612..98963

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003499760 similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 783.0
  • Bit_score: 1524
  • Evalue 0.0
RNA-binding protein {ECO:0000313|EMBL:AHB05661.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 783.0
  • Bit_score: 1458
  • Evalue 0.0
RNA-binding S1 domain-containing protein; K06959 uncharacterized protein similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 783.0
  • Bit_score: 1271
  • Evalue 0.0

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Taxonomy

Pandoraea pnomenusa → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2352
ATGACGCAAAACGTAGCCCTTCAGATCGTTCAACGCATCGCCGACGAACTCAACGTGCAGCCGCGTCAGGTGGCCGCCGCCGTGCAACTGCTCGACGAAGGCGCCACCGTGCCCTTCATCGCTCGCTACCGCAAGGAAGTCACCGATAACCTCGATGACACGCAGTTGCGTACGCTCGAAGAACGCCTGCTTTATCTTCGCGAGCTGGAAGAGCGCCGCGCGGCGATCCTCGCGAACATCGACGAGCAAGGCAAGCTGACCGACGAGCTGCGCACCGCCATCGAGGCGGCCGACACGAAGCAGACGCTCGAAGACCTCTATCTCCCGTACAAGCAAAAGCGGCGCACGCGCGCGCAAATCGCCCGCGAAGCCGGCCTCGAACCGCTCGCGCAGGCCTTGCTTGCCGACCCGACACTCGACCCGCAGGCCGAGGCGGCAAAGTTCGTCGATGCCGAAAAAGGCGTAGCGGACGTCAAGGCTGCGCTCGACGGCGCCCGCGACATCCTGTCAGAACAATTCGGCGAAACGGCCGAGTTGCTCGGCAAGCTGCGCGACTATCTGTGGCATCAGGGCGTCGTGTCGTCGAAGGTCGTCGAGGGCAAGGAAAGCGAGGAAGGCGAGAAATTCCGCGACTATTACGACTACGCCGAGCCGATCGCCGCCGTGCCGTCACATCGCGCACTGGCCCTCTTCCGCGGCCGTAACCTCGGCATTCTGATGGTCAAGCTGGGCCTTGGCGAGGAACTCGACACGCAAATCCCGCATCCGTGCGAAGGCGTGATTGCCGGGCACTTCGGCATTCGCCAGCAGAACCGCGCCGCCGACAAGTGGCTAGGCGATGTCTGCCGTTGGTGCTGGCGCGTAAAGGTGCAGCCGCATCTCGAATCGGAACTGCTCACGCAAATTCGCGAGAGTGCCGAGAGCGAAGCCATTCGCGTGTTCGCTCGTAACCTCAAGGCGCTGTTGCTCGCCGCGCCGGCCGGTCAGAAGGGCGTGATCGGTCTGGACCCGGGCCTGCGGACCGGCGTGAAGGTGGCCGTGGTCGATCGCACCGGCAAGGTGCTGGGCACCGACACCATCTACCCGCACGAACCGCGCCGCGATTGGGACGGCTCGCTCTCGCGACTCGCCAAGATCGCCGCTGCCACCGGGGCGGAACTCGTGAGTATCGGCAACGGTACGGCCTCGCGCGAGACGGACAAGCTTGCGCTGGAGTTGATCAAGCGCCATCCCGAGCTCAAGCTTCAGAAAATCGTGGTCTCGGAAGCCGGGGCCTCGGTGTACTCGGCGTCGGAATTCGCTGCGAAGGAATTCCCCGACCTCGACGTGTCGCTGCGCGGCGCGGTGTCGATCGCCCGCCGCTTGCAAGATCCGCTGGCCGAACTCGTCAAGATCGAGCCGAAGGCCATCGGCGTGGGCCAGTATCAGCATGACGTGAACCAGCGCGAGCTGGCGCGCATGCTCGACGCCGTGGTCGAAGACTGTGTGAACGCCGTGGGCGTGGACGTCAATACCGCTTCGGCACCGCTGCTCGCACGCGTCTCGGGCCTGAACGGCACGCTTGCAAAGAACATCGTGGACTTCCGCGACAGCAACGGCCCGTTCCCGAATCGCGAAGCGCTCAAGAAAGTGCCGCGCCTGGGCGACAAGACCTTCGAGCAGGCCGCCGGCTTCCTGCGCGTGACCGGCGGCGACAATCCGCTGGATCGGTCGTCGGTCCACCCGGAAGCGTATCCGGTCGTCGAACGCATTCTGGCGAAGATCAAGAAGAGCATTGGCGACGTGATGGGCAACGGCTCGATCGTGCGCAGTGTCTCGGCGACCGAATTCGTCGACGAGCGTTTCGGTCTGCCAACCGTCAAGGATATCCTGACCGAACTCGAGAAGCCGGGCCGCGATCCGCGACCGGAGTTCAAGACGGCGACGTTCCAGGAGGGGGTCGAAAAGCTCACCGACCTCAAGCCGGGCATGCAGCTCGAAGGCGTGGTGACAAACGTGGCGGCCTTCGGTGCGTTCATCGACATTGGCGTGCATCAGGACGGCCTGGTGCACGTCTCGGCGATGTCGACGAAGTTCATCAAGGATCCGCACGAGGTCGTGAAGGCCGGCGACATCGTGAAGGTGAAAGTGCTCGAAGTCGATCCGCGCCGCCAGCGCATCTCGCTCACGATGCGCCTGAACGACGACCTGCCGGTGGCGGGGGCGACCGATCGTCCGAGCAGTAGCGGCGGTGGCGCACGCAGCGGCAACGGTGGCAATGGCGGCGGCCAACGTGGCGGCGGCGGTCAACGTCAGCGTGAACCGGAGACGGTGAACGCCATGGCAGCCGCGTTCGCCAAGCTCAAGCGCTAA
PROTEIN sequence
Length: 784
MTQNVALQIVQRIADELNVQPRQVAAAVQLLDEGATVPFIARYRKEVTDNLDDTQLRTLEERLLYLRELEERRAAILANIDEQGKLTDELRTAIEAADTKQTLEDLYLPYKQKRRTRAQIAREAGLEPLAQALLADPTLDPQAEAAKFVDAEKGVADVKAALDGARDILSEQFGETAELLGKLRDYLWHQGVVSSKVVEGKESEEGEKFRDYYDYAEPIAAVPSHRALALFRGRNLGILMVKLGLGEELDTQIPHPCEGVIAGHFGIRQQNRAADKWLGDVCRWCWRVKVQPHLESELLTQIRESAESEAIRVFARNLKALLLAAPAGQKGVIGLDPGLRTGVKVAVVDRTGKVLGTDTIYPHEPRRDWDGSLSRLAKIAAATGAELVSIGNGTASRETDKLALELIKRHPELKLQKIVVSEAGASVYSASEFAAKEFPDLDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVNQRELARMLDAVVEDCVNAVGVDVNTASAPLLARVSGLNGTLAKNIVDFRDSNGPFPNREALKKVPRLGDKTFEQAAGFLRVTGGDNPLDRSSVHPEAYPVVERILAKIKKSIGDVMGNGSIVRSVSATEFVDERFGLPTVKDILTELEKPGRDPRPEFKTATFQEGVEKLTDLKPGMQLEGVVTNVAAFGAFIDIGVHQDGLVHVSAMSTKFIKDPHEVVKAGDIVKVKVLEVDPRRQRISLTMRLNDDLPVAGATDRPSSSGGGARSGNGGNGGGQRGGGGQRQREPETVNAMAAAFAKLKR*