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SCNpilot_cont_1000_bf_scaffold_168_curated_76

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 92096..92920

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000381D5B0 similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 274.0
  • Bit_score: 557
  • Evalue 9.70e-156
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=656178 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea vervacti.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 274.0
  • Bit_score: 542
  • Evalue 4.50e-151
outer membrane assembly lipoprotein YfiO; K05807 putative lipoprotein similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 264.0
  • Bit_score: 365
  • Evalue 1.70e-98

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Taxonomy

Pandoraea vervacti → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGCAAGCCCTGAAACTTGTCAAACACCTGACGCTGGCCGCAATCGTGGTCGGCAGCCTTGCCGCCTGCGGCATTCTGCCGGAGAAGGTCGACGAAACGGCCGGCTGGTCGACGAACAAATTATACTCGGAAGCCAAGGACAGCTTCGATAGCGGCGACTACACGAAGGCCGCCAAGTACTACGAGCTGCTCGAAGGGCGCGATCCGTTCGGCCCGCATGCGCAGCAAGCGCAGATCAACACGGCCTACTCCTATTACAAGGACAACGAGCCGGCGCAGGCCCTCACCGCCATCGACCGCTTCATCCGCCTGCATCCGGACAGCCCGTCGATCGATTACGCCTATTACCTCAAGGGTCTGATCAACTTCAATGACGACCTGGGCCTGTTCGGCCGCTTCTCGGGACAGGATCTCAGCGAGCGCGATCCGAAGGCACTGCGCGCGGCTTACGACAGCTTCAAATACCTGGTCGAGCATTATCCGAGCAGCAAGTACGCCAACGACGCCGCGCTGCGCATGCGCTACGCCGTCAACGCCATGGCCGCCCACGAAGTGCATGCCGCCGAGTACTACTATCGTCGCGGTGCGTACCTGGCGGCCGTGAATCGCGCACAAAGCGCGCTGAAGGACTACGATCAGGCACCGGCGCTCGAAGATGCGCTGGGCATCATGATCAAGTCGTACGACAAACTCGGCATGACCGAACTGCGTGACGACGCTCGTCGCGTGATGGAAAAGACCTATCCTAAGAGCGGTTATCTGACGGTCGGCCATCGCACCGACAACAGCGGCGACAAGAAGTCCTGGTGGCAGCTCTGGCGGTAA
PROTEIN sequence
Length: 275
MQALKLVKHLTLAAIVVGSLAACGILPEKVDETAGWSTNKLYSEAKDSFDSGDYTKAAKYYELLEGRDPFGPHAQQAQINTAYSYYKDNEPAQALTAIDRFIRLHPDSPSIDYAYYLKGLINFNDDLGLFGRFSGQDLSERDPKALRAAYDSFKYLVEHYPSSKYANDAALRMRYAVNAMAAHEVHAAEYYYRRGAYLAAVNRAQSALKDYDQAPALEDALGIMIKSYDKLGMTELRDDARRVMEKTYPKSGYLTVGHRTDNSGDKKSWWQLWR*