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SCNpilot_cont_1000_bf_scaffold_168_curated_56

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(66707..67192)

Top 3 Functional Annotations

Value Algorithm Source
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 159.0
  • Bit_score: 303
  • Evalue 1.60e-79
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 154.0
  • Bit_score: 237
  • Evalue 2.40e-60
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00036C52B1 similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 161.0
  • Bit_score: 315
  • Evalue 3.80e-83

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Taxonomy

Pandoraea pnomenusa → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 486
ATGTTGTCGAAGCTGCGTATCGGCCAGGGCTACGACGTGCATGCCCTCGTGCCGGGGCGCCCGCTCGTGATGGGGGGCGTGACCATCCCGTTCGATCGCGGCCTGCTCGGCCATTCCGACGCCGACGTGCTCCTGCACGCCATCACCGATGCCGTGCTCGGCGCGGCGGCGCTGGGCGACATCGGACGCCACTTTCCCGACACCGATCCCACGTTCAAGGGCGCGAACAGCGTGGTTTTGCTCCAGGAAGCCATGCGGCGCGTGCGTGAGCAGGGCTACGAGGTCGTCAACGTCGACTGCACGGTGATTGCGCAGGCGCCGAAGCTCGCGCCCCATATCGGCGCGATGACGCAGTCGATTGCCGACGCGCTGGGCGTCACCGTCGGTCAGGTGAACGTGAAGGCGAAGACGAACGAAAAGCTGGGCTATCTCGGCCGTCAGGAAGGGATTGAAGCGCAGGCGGCAGCCCTGCTCGTGGCCAGCTGA
PROTEIN sequence
Length: 162
MLSKLRIGQGYDVHALVPGRPLVMGGVTIPFDRGLLGHSDADVLLHAITDAVLGAAALGDIGRHFPDTDPTFKGANSVVLLQEAMRRVREQGYEVVNVDCTVIAQAPKLAPHIGAMTQSIADALGVTVGQVNVKAKTNEKLGYLGRQEGIEAQAAALLVAS*