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SCNpilot_cont_1000_bf_scaffold_404_curated_30

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(32292..33623)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003451272 similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 443.0
  • Bit_score: 857
  • Evalue 5.60e-246
Multidrug transporter MatE {ECO:0000313|EMBL:AJE99220.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 443.0
  • Bit_score: 798
  • Evalue 4.30e-228
MATE efflux family protein; K03327 multidrug resistance protein, MATE family similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 437.0
  • Bit_score: 505
  • Evalue 1.70e-140

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Taxonomy

Pandoraea apista → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1332
ATGAACCCTGCCCCTGCGGCCGTCGGCCACCGGCAACTGCTTCGTCTGGCGGTGCCTATCGTGCTCGCCAATCTCACTCAGCCCCTGCTCTCGGCCGTCGACACAGCCGTGGCCGGTCATCTGCCGGGCGCCGCTTATCTGGGCGGCGTCGCCCTCGGTGCGCTGCTGTTGAACCTGCTCTTCTGGGGCTTCTCGTTCCTGCGCATGGGCACCACGGGCCTCGCGGCACAGGCGTTCGGTGCCGGCGACGCCGAGCGTCTGCGCGACACGCTCGCACGCGCGCTGACGCTGGCGTTCGCGATTGGCGCCGTGTTGCTTGTCTTTCGCGAACCGCTGGTTTCGCTGGGCGTGTCGTGGCTGGGAGGAAGCGCCCAAGTCCAATCCTTAGGACGACAATATGCAAGCATCCGCGTGCTCGCCGCGCCGCTGGCGCTCGGCAACTACGTGGTGCTCGGCTACCTGCTGGCGTGTCAACGCGTGCGGCAAGGGCTTGCCGTGCAGGTGTTCATCAATCTTGTGAACATCGTGGCGGTGTTGATCTTCGTGCGCGGCTTCGACTGGGGGGTGGCAGGTATTGCAGGGGCAACCGCGCTGGCCGATGTGCTCGGCTTTGCGCTGGGCGCCTGGCTGCTCTGGCTCGCACGTACGCCCGGCTTGCCGCCGCTGCGACTGGCCATGCTGGTTGAGCGCGGCGCCCTGTGGCGCTTGCTGCGGCTCAATCTCGATATCTTCCTGCGCACGCTGTTTCTGCAACTCGCCTTTGCCTGGTTCGCTCGCGTGGGGGCGAGACTTGGCGACGTCACGCTCGCCGCCAACGCGCTCCTGCTGAACTTCCAGACGTTCATGGCGTTCGGCCTCGACGGCTTCGCCCACGCGGCCGAAGCCCTTGTGGGCGCCTATGTCGGTGCGCGTCAGCGAGCCGCGCTGCTGCATGCCATCCGGTTGTCGCTGGGCTGGGCGCTGGGCTGCGCCGTCGCGTTTGCCCTCGTCTACGCCGTGGCGGGTGGCGCGATCATCGATGCCCTGACCGATCAGCCGGCACTGCGCACGACGGCGCGCGAATTCTTGCCCTGGGCCGTGCTCTCGCCGCTCGTGGCGGTGTGGTGTTTCCACCTCGACGGCGTCTTCATCGGCGCGACGCGTACGAGGGAACTGCTGACGTCCTCGTTGATCGGCCTGCTGGTCTTTGGCGCGGTCATGCCGTTCACGCTCGATGCCTGGGGCAATCACGGCTTGTGGGTCGCCCTCATGGCATTTCTCGCGACGCGCGGCATCGTGCTGGGGGTGTTGCTGCCGCGCATCTGGCAGAGGCTTGCGCGCCCGATCACGTAA
PROTEIN sequence
Length: 444
MNPAPAAVGHRQLLRLAVPIVLANLTQPLLSAVDTAVAGHLPGAAYLGGVALGALLLNLLFWGFSFLRMGTTGLAAQAFGAGDAERLRDTLARALTLAFAIGAVLLVFREPLVSLGVSWLGGSAQVQSLGRQYASIRVLAAPLALGNYVVLGYLLACQRVRQGLAVQVFINLVNIVAVLIFVRGFDWGVAGIAGATALADVLGFALGAWLLWLARTPGLPPLRLAMLVERGALWRLLRLNLDIFLRTLFLQLAFAWFARVGARLGDVTLAANALLLNFQTFMAFGLDGFAHAAEALVGAYVGARQRAALLHAIRLSLGWALGCAVAFALVYAVAGGAIIDALTDQPALRTTAREFLPWAVLSPLVAVWCFHLDGVFIGATRTRELLTSSLIGLLVFGAVMPFTLDAWGNHGLWVALMAFLATRGIVLGVLLPRIWQRLARPIT*