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SCNpilot_cont_1000_bf_scaffold_404_curated

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_404_curated_1
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112..1215
DNA (1104bp) protein (368aa)
h16_A1319; dehydrogenase (EC:1.-.-.-)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000348B9CA
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KHQ99190.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_cont_1000_bf_scaffold_404_curated_2
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1382..1777)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D3567
Uncharacterized protein {ECO:0000313|EMBL:EON12937.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
hypothetical protein; K07492 putative transposase
SCNpilot_cont_1000_bf_scaffold_404_curated_3
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2505..3320
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00035D274B
IclR family transcriptional regulator {ECO:0000313|EMBL:AKC70037.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
IclR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_404_curated_4
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3568..4947
DNA (1380bp) protein (460aa)
D-galactonate transporter n=1 Tax=Pandoraea sp. B-6 RepID=UPI000346523B
Glucarate transporter {ECO:0000313|EMBL:KHQ99908.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
major facilitator transporter
SCNpilot_cont_1000_bf_scaffold_404_curated_5
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4963..5973)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034CDD50
AraC family transcriptional regulator {ECO:0000313|EMBL:AJE99202.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
AraC family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_404_curated_6
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6117..6884)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B4B68
3-hydroxy-2-methylbutyryl-CoA dehydrogenase {ECO:0000313|EMBL:AIU28886.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
putative oxidoreductase
SCNpilot_cont_1000_bf_scaffold_404_curated_7
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6920..8581)
DNA (1662bp) protein (554aa)
AMP-dependent synthetase/ligase; K01895 acetyl-CoA synthetase [EC:6.2.1.1]
AMP-binding protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003467E0D
AMP-binding protein {ECO:0000313|EMBL:AJF01061.2}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
SCNpilot_cont_1000_bf_scaffold_404_curated_8
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9023..10156
DNA (1134bp) protein (378aa)
RSp0652; acyl-CoA dehydrogenase (EC:1.3.99.-); K00257 [EC:1.3.99.-] rbh
acyl-CoA dehydrogenase n=1 Tax=Pandoraea sp. B-6 RepID=UPI000347BA98
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KHQ99182.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_cont_1000_bf_scaffold_404_curated_9
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10248..11498
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034CEE24
Uncharacterized protein {ECO:0000313|EMBL:KHQ99903.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
3-hydroxyisobutyryl-CoA hydrolase
SCNpilot_cont_1000_bf_scaffold_404_curated_10
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11563..12120
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034AEFD3
Membrane protein {ECO:0000313|EMBL:AHB77082.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
hypothetical protein; K02221 YggT family protein
SCNpilot_cont_1000_bf_scaffold_404_curated_11
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12310..12531)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000365268A
Uncharacterized protein {ECO:0000313|EMBL:KHQ99901.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_cont_1000_bf_scaffold_404_curated_12
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12950..14056
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C258A
RpiR/GlvR family transcriptional regulator {ECO:0000313|EMBL:EON12945.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
h16_A2103; GlvR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_404_curated_13
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14053..15009
DNA (957bp) protein (319aa)
ansA; isoaspartyl aminopeptidase @ Asp-X dipeptidase (EC:3.5.1.1); K13051 beta-aspartyl-peptidase (threonine type) [EC:3.4.19.5]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003480F4F
Isoaspartyl peptidase {ECO:0000313|EMBL:KHQ99900.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_cont_1000_bf_scaffold_404_curated_14
Pandoraea vervacti, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15136..17022
DNA (1887bp) protein (629aa)
glutathione ABC transporter ATP-binding protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000365FDB1
Glutathione ABC transporter ATP-binding protein {ECO:0000313|EMBL:AJP56899.1}; TaxID=656178 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea vervacti.;"
peptide transport system ATP-binding protein; K13892 glutathione transport system ATP-binding protein
SCNpilot_cont_1000_bf_scaffold_404_curated_15
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17146..18705
DNA (1560bp) protein (520aa)
glutathione ABC transporter substrate-binding protein GsiB n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A236C
Glutathione ABC transporter substrate-binding protein GsiB {ECO:0000313|EMBL:AHB77087.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
dppA1b; putative peptide transporter subunit: periplasmic-binding component of ABC superfamily; K13889 glutathione transport system substrate-binding protein
SCNpilot_cont_1000_bf_scaffold_404_curated_16
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18726..19724
DNA (999bp) protein (333aa)
glutathione ABC transporter permease n=1 Tax=Pandoraea sp. B-6 RepID=UPI000349B01A
Glutathione ABC transporter permease {ECO:0000313|EMBL:AHB06798.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
glutathione ABC transporter permease
SCNpilot_cont_1000_bf_scaffold_404_curated_17
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19735..20643
DNA (909bp) protein (303aa)
glutathione ABC transporter permease GsiD n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034757CF
Glutathione ABC transporter permease GsiD {ECO:0000313|EMBL:AHB06797.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
binding-protein-dependent transport system inner membrane protein; K13891 glutathione transport system permease protein
SCNpilot_cont_1000_bf_scaffold_404_curated_18
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20664..21773
DNA (1110bp) protein (370aa)
dmpA2; D-aminopeptidase DmpA (EC:3.4.11.19); K01266 D-aminopeptidase [EC:3.4.11.19]
D-aminopeptidase DmpA n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X0A9_9BURK
D-aminopeptidase DmpA {ECO:0000313|EMBL:EON12951.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_1000_bf_scaffold_404_curated_19
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21798..22616
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003494BE4
D-aminopeptidase {ECO:0000313|EMBL:AJE99213.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
peptide transport protein; K02035 peptide/nickel transport system substrate-binding protein
SCNpilot_cont_1000_bf_scaffold_404_curated_20
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22793..23674
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000349760F
Uncharacterized protein {ECO:0000313|EMBL:EON12953.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_404_curated_21
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23677..24546
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003487D44
Uncharacterized protein {ECO:0000313|EMBL:KHQ99172.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
carboxylesterase
SCNpilot_cont_1000_bf_scaffold_404_curated_22
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24667..25854
DNA (1188bp) protein (396aa)
ugpC1; sn-glycerol-3-phosphate import ATP-binding protein UgpC 1 (EC:3.6.3.20); K05816 sn-glycerol 3-phosphate transport system ATP-binding protein [EC:3.6.3.20]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034BB6FC
Sugar ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EON12957.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_1000_bf_scaffold_404_curated_23
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25964..27268
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D6129
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AJE99215.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
Glycerol-3-phosphate ABC transporter,periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3
SCNpilot_cont_1000_bf_scaffold_404_curated_24
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27377..28252
DNA (876bp) protein (292aa)
ABC transporter permease n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B475D
ABC transporter permease {ECO:0000313|EMBL:KHQ99170.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
sugar ABC transporter permease; K05814 sn-glycerol 3-phosphate transport system permease protein
SCNpilot_cont_1000_bf_scaffold_404_curated_25
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28249..29133
DNA (885bp) protein (295aa)
ABC transporter permease n=1 Tax=Pandoraea sp. B-6 RepID=UPI000347F35A
ABC transporter permease {ECO:0000313|EMBL:AHB77097.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
glycerol-3-phosphate transport system permease; K05815 sn-glycerol 3-phosphate transport system permease protein
SCNpilot_cont_1000_bf_scaffold_404_curated_26
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29238..29699)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034ABBA0
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_404_curated_27
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29966..30220)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034BE352
Uncharacterized protein {ECO:0000313|EMBL:EON12962.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_404_curated_28
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30314..31234)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000345E995
Chemotaxis protein {ECO:0000313|EMBL:AJE99218.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_404_curated_29
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31433..32233
DNA (801bp) protein (267aa)
Inositol-1-monophosphatase (EC:3.1.3.25)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000347E4FE
Histidinol phosphate phosphatase {ECO:0000313|EMBL:KHQ99167.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_cont_1000_bf_scaffold_404_curated_30
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32292..33623)
DNA (1332bp) protein (444aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003451272
Multidrug transporter MatE {ECO:0000313|EMBL:AJE99220.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
MATE efflux family protein; K03327 multidrug resistance protein, MATE family
Displaying items 1-30 of 50 in total

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