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SCNpilot_cont_1000_bf_scaffold_406_curated_24

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 25372..26904

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000362F6B9 similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 503.0
  • Bit_score: 966
  • Evalue 9.80e-279
RND transporter {ECO:0000313|EMBL:KHQ92693.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 499.0
  • Bit_score: 866
  • Evalue 1.90e-248
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 481.0
  • Bit_score: 606
  • Evalue 8.10e-171

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Taxonomy

Pandoraea pnomenusa → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1533
GTGAAATCACGCGTATGCCTGATGAGCGCCGTGGCAGTGGCCGCCGCGCTCGTTGCCGGTTGCACGACCGTCGGGCCTGACTATCATCTTCCGGACCACGCGCTCATGCGCTCGCCCGAAGCCAATGGCCCCATCGCGAACGCAGCGCAGCGCGGTGTCTCGATCGGTGCCGTGCCCGACGACTGGTGGCAACTCTACGACGACCCCAAGCTCGACGCACTCGTGAAAACGGCGCTGGCCGCCAACACGAACATTCGCGTGGCCGCCGCCAACGTGCAGCGCGCGCTCGCGATGTACCACGAAGTCGAATCGGAGAATCTGCCGCAGGGCGGCGTGCAAGCCGAAGCCGCCCGCGCGCAGATCTCCGGCGAGAGCTTCCTGAAGGAAGAAAAATTGCCGGTGGTCAATCTGGCCGCCGCCGCCCTGTCCATCTCGTATCAGATCGACTTCTTCGGCAAACTCGCGCGCGCCGATGAAGCCGCGCTGGCCGCCGCCGAAGCCAGTCAGGCGGCCCTCGACGTCGTGCGTGTGAGCGTGGCCGCCGAAACGGTGCGCGCCTATGTGCAAGGCTGCGCCGCCAACCACGAGTTCGACATTGCCAACGCACAACTGGCGTTGCAGGAAAAGAGCGTCGCGATTACGCGCAAGCTCGTCGACGCCGGGCGCGATCAGCCGACCGATCTGCTGCGAGCGCAAGCGCAGGCCGACACCTTGCGTGCCGCCCTGCCGCGCTTCCAGGCGCAGCACGACGCGGCGACGTACCGACTGGCCGTCATGCTCGGTAAGGTGCCGGGCACGCTCGACGCAAGCGCGGCGCAATGCCGCCGCATTCCTCAACTCGCGCAACCGCTGCCGGTCGGCGACGGCACGGCGCTGCTCAAGCGCCGCCCCGACGTGCGTCAGGCCGAGCGCGAACTCGCCTCCGCCACGGCAAAGATCGGTGTCGCCACGGCAGACCTCTATCCGTCGATCCGCATTGGTGCGTCGATCGGGGCGAGCGGTGTCCTGGAACACTTCGGGCAAGGCCGCACCGAGCAGTGGAGCGTGGGACCGATGATCACGTGGTCGCTGCCGACCAACGGCGTGCGTTCGCACATCAAGGGCATGGAAGCCGGGGCGGATGCCGCGCTCGCGCATTTCGACGGCGTCGTGCTCAAGGCCCTGCAAGAAACACAGACGTCACTCTCGGCATACACGCGTGAGCTGCAGCGCGACGACGCCCTGCGCGATGCCCGCGACAAATCACGCACCGCCGCCGAACAGAACCACAAGCTCTACCAGGCCGGTCGCGCGCCGTATCTGACGAGTCTTGACGCGGAGCGCACGCACGCCAGTGCCGAGGCCGCGCTGGCCGCCTCCGAGACACAAGTCGCGCTGGACCAGGTCAATCTGTTCCTGGCGTTGGGCGGTGGCTGGCAATCGAGTGCCGCGAATGCAAGTCACGACAAGGCGTCGCCGACGGCATCCCATGAGACGGCCGGCAGCAACAACACGCCGGCAACCTCCACGGCATCTTCAGTATCCACCCGTTGA
PROTEIN sequence
Length: 511
VKSRVCLMSAVAVAAALVAGCTTVGPDYHLPDHALMRSPEANGPIANAAQRGVSIGAVPDDWWQLYDDPKLDALVKTALAANTNIRVAAANVQRALAMYHEVESENLPQGGVQAEAARAQISGESFLKEEKLPVVNLAAAALSISYQIDFFGKLARADEAALAAAEASQAALDVVRVSVAAETVRAYVQGCAANHEFDIANAQLALQEKSVAITRKLVDAGRDQPTDLLRAQAQADTLRAALPRFQAQHDAATYRLAVMLGKVPGTLDASAAQCRRIPQLAQPLPVGDGTALLKRRPDVRQAERELASATAKIGVATADLYPSIRIGASIGASGVLEHFGQGRTEQWSVGPMITWSLPTNGVRSHIKGMEAGADAALAHFDGVVLKALQETQTSLSAYTRELQRDDALRDARDKSRTAAEQNHKLYQAGRAPYLTSLDAERTHASAEAALAASETQVALDQVNLFLALGGGWQSSAANASHDKASPTASHETAGSNNTPATSTASSVSTR*