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SCNpilot_cont_1000_bf_scaffold_406_curated_38

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 42123..43055

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Pandoraea sp. B-6 RepID=UPI000376AD2A similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 310.0
  • Bit_score: 600
  • Evalue 1.10e-168
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KDB09673.1}; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 303.0
  • Bit_score: 509
  • Evalue 2.80e-141
catR; LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 84.8
  • Coverage: 303.0
  • Bit_score: 503
  • Evalue 3.50e-140

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Taxonomy

Burkholderia sp. lig30 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 933
ATGAATATTGAGTTGCGCCATATGCGCTACTTCGTGGCGGTTGCGGAAGAACGCAACTTCACGCGCGCCGCCGCACGGCTGCATATCGCACAGCCGCCGCTCAGTCGCCAGATTCAGCAACTCGAGGAGTTGCTCGGCGTTCAACTGTTCGAGCGCGACTCGCGCCCGCTCAAACTGACCGACACGGGGCGCTTTTTTTATTCGCACGCGGTGCAGTTGCTCGCGCAAACCTCCGAACTCGAATCGATGACGCGGCGCGTGGGCAAGATCGATCGCAGCCTGTCGGTCGGTTTTGTCGGCTCGACGCTCTACGGCATGCTGCCGAAGATCATCCGGCGTTTTCGCGGGGAGAACAGCACGGTTGCGCTGAGTCTGCACGAGATGTCGACAATGGATCAGATCCAGGCGCTCAAGGAAGGCCGCATCGATGTCGGCTTCGGCCGCATTCGTCACGAAGACCCGAGCATTCGTCGCGTGGTGCTGCGCGAGGAACGCATGATCGTCGCCCTGCCGCTCGGCCATCCGTTGATCGAGACCAAGCCAGTTCTGTCGCTGCACGACCTCGTGTCGGAAACGCTGATCATTTTTCCCCAAGCCCCTCGCCCGAGCTATGCCGATCAGGTGCTTGCAGCCTTCCACGATCGTGCGCTCAAGCCGGAGCGCATCTACGAGACACGGGAGTTGCAGATTGCGCTCGGGCTTGTCGCGGCTGGCGAAGGCATCGCCATCGTGCCGCAGAGCGTCAATGGCCTCAAACGCGACGACATCGCCTATAAGGAACTCGACGATCCCAATCTTGTATCGCCGATTATCCTGAGCATGCGATTGCTCGACGAGTCGCCCGATATTCGCGCCATGCTCGAATTGATCTACGACCTCTACGTCGAGGGGAACATGGAGCACCTCCAGCCCTCGGACCTCGGCTCACCCTAA
PROTEIN sequence
Length: 311
MNIELRHMRYFVAVAEERNFTRAAARLHIAQPPLSRQIQQLEELLGVQLFERDSRPLKLTDTGRFFYSHAVQLLAQTSELESMTRRVGKIDRSLSVGFVGSTLYGMLPKIIRRFRGENSTVALSLHEMSTMDQIQALKEGRIDVGFGRIRHEDPSIRRVVLREERMIVALPLGHPLIETKPVLSLHDLVSETLIIFPQAPRPSYADQVLAAFHDRALKPERIYETRELQIALGLVAAGEGIAIVPQSVNGLKRDDIAYKELDDPNLVSPIILSMRLLDESPDIRAMLELIYDLYVEGNMEHLQPSDLGSP*