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SCNpilot_cont_1000_bf_scaffold_132_curated_1

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 37..339

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C35A3 similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 93.0
  • Bit_score: 178
  • Evalue 2.60e-42
LysR family transcriptional regulator {ECO:0000313|EMBL:AJE98110.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 93.0
  • Bit_score: 177
  • Evalue 8.20e-42
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 93.0
  • Bit_score: 155
  • Evalue 7.50e-36

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Taxonomy

Pandoraea apista → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
GTGGTACGAGAAAAGCAGTCAGGTCAGACGCGCATCACCGGGTCGCCGTCGATTGCCGTGATCGTGCAGCTGGTGAGAGACGGGTTTGGTGTCGCGGCGATTCCGCGGCTGTTCGTCGACGATCTGATTGCGAGCGGTGAAGTCGCGGAGCTGCCGTTGCAGCCGGCGCCGCCGTCCATCGTGGTGTCGATGTCGCGACGCGCCGACGCGCCGCTCTTCGTGCATGGCGCGGCCACGGCCGCGCGCACGGCGTGCTCGGAATACTGCCGCAAGAGCGACCGGCGGCTGGTGGAATTGTTGTGA
PROTEIN sequence
Length: 101
VVREKQSGQTRITGSPSIAVIVQLVRDGFGVAAIPRLFVDDLIASGEVAELPLQPAPPSIVVSMSRRADAPLFVHGAATAARTACSEYCRKSDRRLVELL*