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SCNpilot_cont_1000_bf_scaffold_106_curated_26

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 34316..35695

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000348899C similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 459.0
  • Bit_score: 883
  • Evalue 1.30e-253
OmpR family response regulator {ECO:0000313|EMBL:AHB75457.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 459.0
  • Bit_score: 842
  • Evalue 2.70e-241
transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 456.0
  • Bit_score: 609
  • Evalue 8.60e-172

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Taxonomy

Pandoraea sp. RB-44 → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1380
ATGGCCGGTATTGGCTTTGAACTTCGCAAGATTCTCCGGCGCGACACGCTGACCAGCACGCTGGCGGCCTATGGCTACGCCGGGGTCATCAGCGCGGGCCCGCTGATTCTCTCGATTCTCGGTATTCTGCTCATCGGCCTGATGAGCCTCGCCGTCGTGCAACCGCCGGGCCTCATCGTGCAGTTCCAGGTGTCGGTGACGTATCTGATCGCGTTCAGCCTCATCGTCACGGGCATACTTCAACTCTCGTTCACACGCTTTCTGAGCGACCGGCTGTTCGAGCGGCGTCCCGATCTGGTGCTGCCGAACTACAACGCGGTCGCATTGGTAACGACGGTTGGCACGGGCATCATCGGCCTCATCCTCGCGCTGACCGTGTTCCGCGGTCAGTCCACGGGCTATCGGTTGTTGATGCTCACGGGCTTCGTGATCGTGAGCAATATCTGGATCGGCGTGTTGTTTCTCACGAGCGTGAAGCAATACCGTGCCGTGCTGGCGATCTTCTTCGTCGGCTACACCGTGACGGTGGTGAGTGCGGTGCTGCTCAACCGATACGGGCTCGAAGGGCTGCTCGGCGGTTTCGTCATCGGTCACCTGATCCTGCTGCTCGGCATGGTCTGCCTGATTCACCGCAATTACCGCACGGACGAATATCTGCTTTGGCAGGTCTTTGCGCGTCGCTTCTCGTATCCGTCGTTGATGTTCGTGGGTTTGCTGTTCAATCTGGGCATCTGGCTCGACAAGCTGATGTTCTGGTTCTATCCGGTAACCGGGCAGGACGTGATCGGCCCGCTGCGCGCGTCGGTGATCTACGATCTGCCGGTGTTTCTCTCGTACCTGTGCGTGATTCCGGGTATGGCGGTGTTTCTGCTGCGTATCGAGACGGATTTCGTCGAGTACTACGATCAGTTCTTCAACGCGGTGCGTACCGGCGGAACGCTCAAGTACATCGAGGAATCGCGCGACATGATGGTGCGCTCGGTCCGCACCGGTCTGTACGAAATCCTGAAGATCCAGGCGGTCGTTACGCTGCTGATCTTCGCGTTCGGCGACAAGCTGTTGCGGCTGATCGGCATTTCGGTGCTGTACCTGCCGCTGCTGCACATCGACGTCATTTCCGCGAGCCTGCAAGTGCTTTTCCTCGGGATTCTGAACATCTTCTTTTATCTGGACCGGCGTGGCACGGTGCTGGCGCTCACCGCCGCGATGGTCGTCGCCAACGGCCTGTTTACGTGGGTCACGCTGATGCTCGGACCGAATGCGTACGGCTACGGTTTCGCGCTGGCGCTGCTGGTCGTCGTGATGGTGGCGATGCAGTTGCTCGATCGCCGGCTCGACGCGCTCGAATATGAAACCTACATGCTGCAACAGCAGCGCTGA
PROTEIN sequence
Length: 460
MAGIGFELRKILRRDTLTSTLAAYGYAGVISAGPLILSILGILLIGLMSLAVVQPPGLIVQFQVSVTYLIAFSLIVTGILQLSFTRFLSDRLFERRPDLVLPNYNAVALVTTVGTGIIGLILALTVFRGQSTGYRLLMLTGFVIVSNIWIGVLFLTSVKQYRAVLAIFFVGYTVTVVSAVLLNRYGLEGLLGGFVIGHLILLLGMVCLIHRNYRTDEYLLWQVFARRFSYPSLMFVGLLFNLGIWLDKLMFWFYPVTGQDVIGPLRASVIYDLPVFLSYLCVIPGMAVFLLRIETDFVEYYDQFFNAVRTGGTLKYIEESRDMMVRSVRTGLYEILKIQAVVTLLIFAFGDKLLRLIGISVLYLPLLHIDVISASLQVLFLGILNIFFYLDRRGTVLALTAAMVVANGLFTWVTLMLGPNAYGYGFALALLVVVMVAMQLLDRRLDALEYETYMLQQQR*