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SCNpilot_cont_1000_bf_scaffold_106_curated

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Displaying items 1-30 of 117 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_106_curated_1
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(257..1135)
DNA (879bp) protein (293aa)
2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase {ECO:0000256|HAMAP-Rule:MF_01654}; EC=3.7.1.14 {ECO:0000256|HAMAP-Rule:MF_01654};; 2-hydroxy-6-ketonona-2,4-diene-1,9-dioic acid 5,6-hydrolase {ECO:0000256|HAMAP-Rule:MF_01654}; 2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioic acid 5,6-hydrolase {ECO:0000256|HAMAP-Rule:MF_01654}; 2-hydroxy-6-oxonona-2,4-diene-1,9-dioic acid 5,6-hydrolase {ECO:0000256|HAMAP-Rule:MF_01654}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; B
alpha/beta hydrolase; K05714 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase [EC:3.7.1.-]
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034748E0
SCNpilot_cont_1000_bf_scaffold_106_curated_2
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1247..2533)
DNA (1287bp) protein (429aa)
MFS transporter n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C7125
MFS transporter {ECO:0000313|EMBL:AJF00534.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
3-hydroxyphenylpropionic transporter MhpT
SCNpilot_cont_1000_bf_scaffold_106_curated_3
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2809..3594)
DNA (786bp) protein (262aa)
4-oxalocrotonate decarboxylase (EC:4.1.1.77); K01617 4-oxalocrotonate decarboxylase [EC:4.1.1.77]
2-keto-4-pentenoate hydratase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034CB331
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:AJF00533.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
SCNpilot_cont_1000_bf_scaffold_106_curated_4
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3610..4569)
DNA (960bp) protein (320aa)
2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01653}; EC=1.13.11.16 {ECO:0000256|HAMAP-Rule:MF_01653};; 3-carboxyethylcatechol 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01653}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
mhpB; 3-(2,3-dihydroxyphenyl)propionate dioxygenase (EC:1.13.11.16); K05713 2,3-dihydroxyphenylpropionate 1,2-dioxygenase [EC:1.13.11.16]
3-(2,3-dihydroxyphenyl)propionate dioxygenase n=1 Tax=Pandoraea sp. B-6 RepID=UPI000369F7CD
SCNpilot_cont_1000_bf_scaffold_106_curated_5
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4573..6426)
DNA (1854bp) protein (618aa)
3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase {ECO:0000256|HAMAP-Rule:MF_01652}; Short=3-HCI hydroxylase {ECO:0000256|HAMAP-Rule:MF_01652};; Short=3-HPP hydroxylase {ECO:0000256|HAMAP-Rule:MF_01652};; EC=1.14.13.127 {ECO:0000256|HAMAP-Rule:MF_01652};; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
mhpA; 3-(3-hydroxyphenyl)propionate hydroxylase; K05712 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
3-(3-hydroxyphenyl)propionate hydroxylase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B2A66
SCNpilot_cont_1000_bf_scaffold_106_curated_6
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6684..7529
DNA (846bp) protein (282aa)
transcriptional regulator n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034610D0
Transcriptional regulator {ECO:0000313|EMBL:AJF01327.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
DNA-binding transcriptional activator MhpR; K05818 IclR family transcriptional regulator, mhp operon transcriptional activator
SCNpilot_cont_1000_bf_scaffold_106_curated_7
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7693..8244)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034514A4
Uncharacterized protein {ECO:0000313|EMBL:EPX97683.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
hypothetical protein; K09932 hypothetical protein
SCNpilot_cont_1000_bf_scaffold_106_curated_8
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8698..9519
DNA (822bp) protein (274aa)
thcF; Non-heme haloperoxidase ThcF (EC:1.11.1.-); K00433 chloride peroxidase [EC:1.11.1.10]
chloroperoxidase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A8A29
Chloroperoxidase {ECO:0000313|EMBL:ESJ04017.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
SCNpilot_cont_1000_bf_scaffold_106_curated_9
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9564..10013
DNA (450bp) protein (150aa)
DoxX protein n=2 Tax=Pandoraea RepID=V5UHC8_9BURK
DoxX protein {ECO:0000313|EMBL:AHB76657.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_106_curated_10
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10182..10715)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D7616
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
SCNpilot_cont_1000_bf_scaffold_106_curated_11
Medicago truncatula, Medicago, Fabales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(10921..11910)
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000347EB8E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEH32788.1, ECO:0000313|EnsemblPlants:KEH32788}; TaxID=3880 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago.;" source="Medicago truncatula (Barrel medic) (Medicago tribuloides).;"
SCNpilot_cont_1000_bf_scaffold_106_curated_12
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11968..12813)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000375F4A2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ30297.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
SCNpilot_cont_1000_bf_scaffold_106_curated_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13078..14553)
DNA (1476bp) protein (492aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000365A56D
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_cont_1000_bf_scaffold_106_curated_14
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14807..16366)
DNA (1560bp) protein (520aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000369E6AE
Peptidase {ECO:0000313|EMBL:AJC22302.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
putative integral membrane protein
SCNpilot_cont_1000_bf_scaffold_106_curated_15
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16393..18705)
DNA (2313bp) protein (771aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00038128C1
Ligand-gated channel protein {ECO:0000313|EMBL:AJE99902.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
tonB; TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
SCNpilot_cont_1000_bf_scaffold_106_curated_16
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18788..19153)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D94A5
Uncharacterized protein {ECO:0000313|EMBL:AJE99903.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
SCNpilot_cont_1000_bf_scaffold_106_curated_17
Pandoraea vervacti, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19368..20315)
DNA (948bp) protein (316aa)
LysR family transcriptional regulator n=1 Tax=Burkholderia terrae BS001 RepID=I5CGY9_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:AJP56824.1}; TaxID=656178 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea vervacti.;"
LysR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_106_curated_18
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20431..21705
DNA (1275bp) protein (425aa)
Major facilitator protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CGZ0_9BURK
MFS transporter {ECO:0000313|EMBL:AJC22373.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
major facilitator protein
SCNpilot_cont_1000_bf_scaffold_106_curated_19
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21965..22237
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000368A964
LysR family transcriptional regulator {ECO:0000313|EMBL:EON15290.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_1000_bf_scaffold_106_curated_20
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22728..25619
DNA (2892bp) protein (964aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000368F7FE
Sugar ABC transporter {ECO:0000313|EMBL:AHB75452.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
polysaccharide transport system component signal peptide protein (ragA)
SCNpilot_cont_1000_bf_scaffold_106_curated_21
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25657..29775
DNA (4119bp) protein (1373aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C5D6D
Uncharacterized protein {ECO:0000313|EMBL:AHB08202.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
polysaccharide transport system component signal peptide protein (ragB)
SCNpilot_cont_1000_bf_scaffold_106_curated_22
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29806..30351
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D79F9
Uncharacterized protein {ECO:0000313|EMBL:AHB04157.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
putative lipoprotein
SCNpilot_cont_1000_bf_scaffold_106_curated_23
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30363..31775
DNA (1413bp) protein (471aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000346CB23
Membrane protein {ECO:0000313|EMBL:AHB04156.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
transmembrane protein
SCNpilot_cont_1000_bf_scaffold_106_curated_24
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31768..32769
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A9491
Membrane protein {ECO:0000313|EMBL:AHB04155.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
transmembrane protein
SCNpilot_cont_1000_bf_scaffold_106_curated_25
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32769..34316
DNA (1548bp) protein (516aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000349C655
Glycosyl transferase family 1 {ECO:0000313|EMBL:AHB04154.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
group1 glycosyl transferase
SCNpilot_cont_1000_bf_scaffold_106_curated_26
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34316..35695
DNA (1380bp) protein (460aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000348899C
OmpR family response regulator {ECO:0000313|EMBL:AHB75457.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
transmembrane protein
SCNpilot_cont_1000_bf_scaffold_106_curated_27
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35722..36621
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000380C5F6
Uncharacterized protein {ECO:0000313|EMBL:AIU27144.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
Putative signal peptide protein
SCNpilot_cont_1000_bf_scaffold_106_curated_28
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36784..38616
DNA (1833bp) protein (611aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_0016
glucosamine--fructose-6-phosphate aminotransferase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D3E1E
SCNpilot_cont_1000_bf_scaffold_106_curated_29
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38647..39669
DNA (1023bp) protein (341aa)
UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00035E477A
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AHB04150.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
SCNpilot_cont_1000_bf_scaffold_106_curated_30
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39796..40830)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C9ADC
LacI family transcriptional regulator {ECO:0000313|EMBL:AJC21302.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
LacI family transcriptional regulator
Displaying items 1-30 of 117 in total

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