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SCNpilot_cont_1000_p_scaffold_328_curated

Search features with annotation key words

Displaying items 1-30 of 109 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_328_curated_1
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(50..1390)
DNA (1341bp) protein (447aa)
FAD/FMN-dependent dehydrogenase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RRA2_BLASD
FAD/FMN-dependent dehydrogenase
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:CCG04182.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
SCNpilot_cont_1000_p_scaffold_328_curated_2
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1452..4298)
DNA (2847bp) protein (949aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000382B197
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:EWM13695.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
protein kinase
SCNpilot_cont_1000_p_scaffold_328_curated_3
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4696..5193
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B4E88D
Uncharacterized protein {ECO:0000313|EMBL:KGN42887.1}; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
SCNpilot_cont_1000_p_scaffold_328_curated_4
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5190..6947
DNA (1758bp) protein (586aa)
hypothetical protein n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B57F67
Uncharacterized protein {ECO:0000313|EMBL:KGN42888.1}; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
SCNpilot_cont_1000_p_scaffold_328_curated_5
unknown

Not on your lists

7377..7520
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_328_curated_6
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7915..8664
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X6M9_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EHR51250.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_328_curated_7
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

8742..9131
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI0003815AD7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ42356.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_cont_1000_p_scaffold_328_curated_8
unknown

Not on your lists

9228..9719
DNA (492bp) protein (164aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_328_curated_9
unknown

Not on your lists

9847..10269
DNA (423bp) protein (141aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_328_curated_10
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10420..12210)
DNA (1791bp) protein (597aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036CF8BE
Histidine kinase,'ATPase, histidine kinase/DNA gyrase B/HSP90-like',GAF domain-containing protein {ECO:0000313|EMBL:EXG82486.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
GAF sensor signal transduction histidine kinase
SCNpilot_cont_1000_p_scaffold_328_curated_11
unknown

Not on your lists

comp(12685..12882)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_328_curated_12
Rhodococcus rhodochrous, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12958..13455)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. EsD8 RepID=N1M9M3_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:ETT24063.1}; TaxID=1429046 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous ATCC 21198.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_328_curated_13
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13452..14153)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XI14_NAKMY
Uncharacterized protein {ECO:0000313|EMBL:GAM48038.1}; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_328_curated_14
Kocuria polaris, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14150..14929)
DNA (780bp) protein (260aa)
dienelactone hydrolase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45]
hypothetical protein n=1 Tax=Kocuria sp. UCD-OTCP RepID=UPI00037A09F1
Dienelactone hydrolase {ECO:0000313|EMBL:KHD97844.1}; TaxID=136273 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria polaris.;"
SCNpilot_cont_1000_p_scaffold_328_curated_15
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15228..15521)
DNA (294bp) protein (98aa)
Uncharacterized protein n=4 Tax=Rhodococcus RepID=Q0S1X4_RHOSR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG98462.1}; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
SCNpilot_cont_1000_p_scaffold_328_curated_16
Mycobacterium triplex, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15825..16799
DNA (975bp) protein (325aa)
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0J8H4_MYCSM
5,10-methylenetetrahydromethanopterin reductase {ECO:0000313|EMBL:CDO87186.1}; TaxID=47839 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium triplex.;"
flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase
SCNpilot_cont_1000_p_scaffold_328_curated_17
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16830..17603
DNA (774bp) protein (258aa)
UPI0003D6A1D6 related cluster n=1 Tax=unknown RepID=UPI0003D6A1D6
Crotonase {ECO:0000313|EMBL:AKE00080.1}; TaxID=1833 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis (Arthrobacter picolinophilus).;"
enoyl-CoA hydratase
SCNpilot_cont_1000_p_scaffold_328_curated_18
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17600..18772
DNA (1173bp) protein (391aa)
Acyl-CoA dehydrogenase n=1 Tax=Rhodococcus pyridinivorans AK37 RepID=H0JLS4_9NOCA
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AKE00079.1}; TaxID=1833 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis (Arthrobacter picolinophilus).;"
acyl-CoA dehydrogenase
SCNpilot_cont_1000_p_scaffold_328_curated_19
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18765..19853
DNA (1089bp) protein (363aa)
Acyl-CoA dehydrogenase n=1 Tax=Rhodococcus pyridinivorans AK37 RepID=H0JLS3_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:AKE00078.1}; TaxID=1833 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis (Arthrobacter picolinophilus).;"
acyl-CoA dehydrogenase
SCNpilot_cont_1000_p_scaffold_328_curated_20
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19863..21494
DNA (1632bp) protein (544aa)
UPI0003D6B5EC related cluster n=1 Tax=unknown RepID=UPI0003D6B5EC
Acid--CoA ligase {ECO:0000313|EMBL:AHD21487.1}; TaxID=1435356 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans SB3094.;"
acid-CoA ligase
SCNpilot_cont_1000_p_scaffold_328_curated_21
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21491..22363
DNA (873bp) protein (291aa)
5-valerolactone hydrolase n=1 Tax=Rhodococcus pyridinivorans AK37 RepID=H0JLS1_9NOCA
5-valerolactone hydrolase {ECO:0000313|EMBL:EHK85823.1}; TaxID=1114960 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans AK37.;"
5-valerolactone hydrolase
SCNpilot_cont_1000_p_scaffold_328_curated_22
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22422..23645
DNA (1224bp) protein (408aa)
UPI0003D6B4B3 related cluster n=1 Tax=unknown RepID=UPI0003D6B4B3
TetR family transcriptional regulator {ECO:0000313|EMBL:AHD21491.1}; TaxID=1435356 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans SB3094.;"
transcriptional regulator
SCNpilot_cont_1000_p_scaffold_328_curated_23
Synechococcus sp. JA-2-3B'a(2-13), Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

24739..26304
DNA (1566bp) protein (522aa)
Oxidoreductase, 2OG-Fe(II) oxygenase family n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JP29_SYNJB
2OG-Fe(II) oxygenase
Oxidoreductase, 2OG-Fe(II) oxygenase family {ECO:0000313|EMBL:ABD01466.1}; TaxID=321332 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium; Yellowstone B-Prime).;"
SCNpilot_cont_1000_p_scaffold_328_curated_24
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(26294..27289)
DNA (996bp) protein (332aa)
gME-2; GDP-mannose 3,5-epimerase 2 (EC:5.1.3.18)
GDP-mannose 3,5-epimerase 1 n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FSQ1_PHAMO
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
SCNpilot_cont_1000_p_scaffold_328_curated_25
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(27305..27940)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X2I9_ACISM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW69213.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
SCNpilot_cont_1000_p_scaffold_328_curated_26
unknown

Not on your lists

comp(27988..28710)
DNA (723bp) protein (241aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_328_curated_27
Nostoc sp. PCC 7107, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

29036..31348
DNA (2313bp) protein (771aa)
Uncharacterized protein n=1 Tax=Nostoc sp. PCC 7107 RepID=K9QI74_9NOSO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY45098.1}; TaxID=317936 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. PCC 7107.;"
SCNpilot_cont_1000_p_scaffold_328_curated_28
Luminiphilus syltensis, Luminiphilus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31345..32910
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KYM2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EED35335.1}; TaxID=565045 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Luminiphilus.;" source="Luminiphilus syltensis NOR5-1B.;"
SCNpilot_cont_1000_p_scaffold_328_curated_29
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33186..34571)
DNA (1386bp) protein (462aa)
Putative uncharacterized protein n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XCB9_9PSEU
Putative uncharacterized protein {ECO:0000313|EMBL:EHR59125.1}; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2
SCNpilot_cont_1000_p_scaffold_328_curated_30
unknown

Not on your lists

comp(35167..35517)
DNA (351bp) protein (117aa)

This feature has no annotations

Displaying items 1-30 of 109 in total

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