ggKbase home page

SCNpilot_cont_1000_p_scaffold_2386_curated

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2386_curated_1

Not on your lists

1166..1666
DNA (501bp) protein (167aa)
Protein containing GCN5-related N-acetyltransferase domain n=1 Tax=sediment metagenome RepID=D9PL15_9ZZZZ
Protein containing GCN5-related N-acetyltransferase domain {ECO:0000313|EMBL:EFK95750.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
SCNpilot_cont_1000_p_scaffold_2386_curated_2
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2037..2618)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEDE2
Uncharacterized protein {ECO:0000313|EMBL:AHH94657.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2386_curated_3
unknown

Not on your lists

2723..2950
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2386_curated_4
Saccharomonospora xinjiangensis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3102..3620)
DNA (519bp) protein (173aa)
Acetyltransferase n=1 Tax=Saccharomonospora xinjiangensis XJ-54 RepID=I0V5U9_9PSEU
Acetyltransferase {ECO:0000313|EMBL:EID55502.1}; TaxID=882086 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora xinjiangensis XJ-54.;"
acetyltransferase
SCNpilot_cont_1000_p_scaffold_2386_curated_5
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3617..4402)
DNA (786bp) protein (262aa)
Transcriptional regulator n=1 Tax=Saccharomonospora azurea SZMC 14600 RepID=H0K6G4_9PSEU
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AHH17606.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
transcriptional regulator
SCNpilot_cont_1000_p_scaffold_2386_curated_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4528..4959
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT2_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27657.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_2386_curated_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5067..5468
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT3_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27658.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_2386_curated_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5465..5785
DNA (321bp) protein (107aa)
Transcriptional regulator WhiB n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT4_PSEUX
transcription factor WhiB
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_2386_curated_9
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6112..7698
DNA (1587bp) protein (529aa)
cell division protein FtsK n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262761F
DNA segregation ATPase FtsK/SpoIIIE {ECO:0000313|EMBL:AIJ26857.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
ftsK; DNA segregation ATPase FtsK/SpoIIIE
SCNpilot_cont_1000_p_scaffold_2386_curated_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7695..9389
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT7_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27662.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_2386_curated_11
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9389..9604
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003643343
Xis {ECO:0000313|EMBL:KGN30313.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
excisionase family DNA binding domain-containing protein
SCNpilot_cont_1000_p_scaffold_2386_curated_12
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9604..10827
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Salinispora arenicola RepID=UPI000361273B
integrase family protein
Integrase family protein {ECO:0000313|EMBL:AGL21466.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
SCNpilot_cont_1000_p_scaffold_2386_curated_13
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10897..11367)
DNA (471bp) protein (157aa)
endonuclease n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00036A8F7A
Endonuclease {ECO:0000313|EMBL:KDN23912.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
Endonuclease/exonuclease/phosphatase
SCNpilot_cont_1000_p_scaffold_2386_curated_14
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11914..12336)
DNA (423bp) protein (141aa)
NUDIX hydrolase n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8L5X4_FRASN
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ABW14931.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
SCNpilot_cont_1000_p_scaffold_2386_curated_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12346..12828)
DNA (483bp) protein (161aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS48_PSEUX
CMP/dCMP deaminase zinc-binding protein
SCNpilot_cont_1000_p_scaffold_2386_curated_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12825..13343)
DNA (519bp) protein (173aa)
tRNA adenosine deaminase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF14D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22607.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_2386_curated_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13436..14641
DNA (1206bp) protein (402aa)
amidohydrolase; K01451 hippurate hydrolase [EC:3.5.1.32]
Amidohydrolase {ECO:0000313|EMBL:AEA22606.1}; EC=3.5.1.47 {ECO:0000313|EMBL:AEA22606.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Amidohydrolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS46_PSEUX
Displaying 17 items

View Taxonomy