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SCNpilot_cont_1000_p_scaffold_596_curated_8

Organism: scnpilot_dereplicated_Pseudonocardia_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(4880..5365)

Top 3 Functional Annotations

Value Algorithm Source
Membrane-flanked domain DUF304 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTG8_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 159.0
  • Bit_score: 238
  • Evalue 5.90e-60
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 159.0
  • Bit_score: 238
  • Evalue 1.80e-60
Membrane-flanked domain DUF304 {ECO:0000313|EMBL:AEA27393.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.4
  • Coverage: 159.0
  • Bit_score: 238
  • Evalue 8.20e-60

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 486
GTGGCCTATCCGGACGATCTCCTCGTCGCCGGCGAGCAGATCGTCATGCACAAGCACCCGCACTGGAAGATGCTCGTGGTGCCGGTGGTCGTGCTGCTGGTGGTCGTCGCGCTGGGTGCGTTCCTGGCCGCGCTGGTGCGGGCCCAGCCCTGGGCGCCCTGGGGGTGGCTCGCGATCGCGGTGGTGGGGCTCGGGCTGATCGGCCGGTTCACGCTGTGGCCCGTGCTGCGCTGGCGCACCACGCACTTCGTGGTCACCACGCGCCGGGTGCTGATCCGGGAGGGTGTGCTGTCGCGGCAGGGCATCGACATCCCGATGAGCCGCATCAACAGCGTGCAGTTCCGGCACACGATCGTCGAACGCATGCTCGGCTGCGGCACCCTGGTCATCGAGTCGGCGTCGGACGAGCCGCTGGAGTTCGACGACGTGCCGGGCGTGGAACGCGTGCACGCGCTGCTGTACCAGGAGGTGGCCGATGAATCCTAG
PROTEIN sequence
Length: 162
VAYPDDLLVAGEQIVMHKHPHWKMLVVPVVVLLVVVALGAFLAALVRAQPWAPWGWLAIAVVGLGLIGRFTLWPVLRWRTTHFVVTTRRVLIREGVLSRQGIDIPMSRINSVQFRHTIVERMLGCGTLVIESASDEPLEFDDVPGVERVHALLYQEVADES*