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SCNpilot_cont_1000_p_scaffold_596_curated

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_596_curated_1
unknown

Not on your lists

comp(2..79)
DNA (78bp) protein (26aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_596_curated_2
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

158..2038
DNA (1881bp) protein (627aa)
signal transduction histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-]
Signal transduction histidine kinase {ECO:0000313|EMBL:AAZ54978.1}; EC=2.7.3.- {ECO:0000313|EMBL:AAZ54978.1};; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
Signal transduction histidine kinase n=1 Tax=Thermobifida fusca (strain YX) RepID=Q47RD9_THEFY
SCNpilot_cont_1000_p_scaffold_596_curated_3
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2035..2424
DNA (390bp) protein (130aa)
dynein regulation protein LC7 n=1 Tax=Actinokineospora enzanensis RepID=UPI000371C68C
Uncharacterized protein {ECO:0000313|EMBL:CEL19581.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
Roadblock/LC7 family protein
SCNpilot_cont_1000_p_scaffold_596_curated_4
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2448..2774
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MRM3_SACVD
Uncharacterized protein {ECO:0000313|EMBL:KJS52221.1}; TaxID=1615590 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus subsp. indigoferus.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_596_curated_5
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2764..3336
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P287_STRVO
ATP-binding protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEM81629.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
SCNpilot_cont_1000_p_scaffold_596_curated_6
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3338..3877)
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4IZP2_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:CEL22606.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_596_curated_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3955..4890)
DNA (936bp) protein (312aa)
Hydroxymethylglutaryl-CoA lyase; K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:AEA27392.1}; EC=4.1.3.4 {ECO:0000313|EMBL:AEA27392.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTG7_PSEUX
SCNpilot_cont_1000_p_scaffold_596_curated_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4880..5365)
DNA (486bp) protein (162aa)
Membrane-flanked domain DUF304 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTG8_PSEUX
hypothetical protein
Membrane-flanked domain DUF304 {ECO:0000313|EMBL:AEA27393.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_596_curated_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5898..6704)
DNA (807bp) protein (269aa)
biotin-(acetyl-CoA carboxylase) ligase; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
Biotin/acetyl-CoA-carboxylase ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTG9_PSEUX
Biotin/acetyl-CoA-carboxylase ligase {ECO:0000313|EMBL:AEA27394.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_596_curated_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6875..8500
DNA (1626bp) protein (542aa)
propionyl-CoA carboxylase; K01966 propionyl-CoA carboxylase beta chain [EC:6.4.1.3]
Propionyl-CoA carboxylase {ECO:0000313|EMBL:AEA27395.1}; EC=6.4.1.3 {ECO:0000313|EMBL:AEA27395.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Propionyl-CoA carboxylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTH0_PSEUX
SCNpilot_cont_1000_p_scaffold_596_curated_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8583..8813
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTH1_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27396.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_596_curated_12
Deinococcus swuensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

8880..9161
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI000382900F
Uncharacterized protein {ECO:0000313|EMBL:AIZ45810.1}; TaxID=1182571 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus swuensis.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_596_curated_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9238..9759
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQJ3_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22591.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_596_curated_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9756..10847
DNA (1092bp) protein (364aa)
Histidine kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQJ2_PSEUX
histidine kinase
Histidine kinase {ECO:0000313|EMBL:AEA22590.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_596_curated_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10820..11482
DNA (663bp) protein (221aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQJ1_PSEUX
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEA22589.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_596_curated_16
unknown

Not on your lists

11582..11752
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_596_curated_17
unknown

Not on your lists

11786..11911
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_596_curated_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11960..12580
DNA (621bp) protein (207aa)
Maf-like protein Psed_5263 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTH2_PSEUX
Septum formation protein Maf; K06287 septum formation protein
Maf-like protein Psed_5263 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_596_curated_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12629..13519
DNA (891bp) protein (297aa)
thiosulfate sulfurtransferase; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
Thiosulfate sulfurtransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTH3_PSEUX
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_596_curated_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13516..13944
DNA (429bp) protein (143aa)
Fe-S metabolism associated SufE n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTH4_PSEUX
Fe-S metabolism associated SufE; K02426 cysteine desulfuration protein SufE
Fe-S metabolism associated SufE {ECO:0000313|EMBL:AEA27399.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_596_curated_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14038..14946
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTH5_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27400.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_596_curated_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14906..15793
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTH6_PSEUX
hypothetical protein; K09930 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27401.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_596_curated_23
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15790..16269
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FFG6_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB46268.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
SCNpilot_cont_1000_p_scaffold_596_curated_24
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16301..16906
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B3F030
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:ACZ31265.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
SCNpilot_cont_1000_p_scaffold_596_curated_25
Rhodococcus rhodochrous, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16906..18027
DNA (1122bp) protein (374aa)
glycosyltransferase (EC:2.4.-.-)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036762B7
Glycosyltransferase 28 domain-containing protein {ECO:0000313|EMBL:ETT25531.1}; TaxID=1429046 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous ATCC 21198.;"
SCNpilot_cont_1000_p_scaffold_596_curated_26
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17997..18362)
DNA (366bp) protein (122aa)
Metallothiol transferase FosB n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PWT5_STANL
Uncharacterized protein {ECO:0000313|EMBL:KFE68965.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
metallothiol transferase FosB
SCNpilot_cont_1000_p_scaffold_596_curated_27
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18433..18855
DNA (423bp) protein (141aa)
Transcriptional regulator n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0F7A6_9NOCA
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CEL22848.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
transcriptional regulator
SCNpilot_cont_1000_p_scaffold_596_curated_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18863..20098)
DNA (1236bp) protein (412aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:AEA25148.1}; EC=1.3.8.1 {ECO:0000313|EMBL:AEA25148.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Butyryl-CoA dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPN1_PSEUX
butyryl-CoA dehydrogenase
SCNpilot_cont_1000_p_scaffold_596_curated_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20136..21122)
DNA (987bp) protein (329aa)
Transcriptional regulator, AraC family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPN2_PSEUX
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEA25149.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_596_curated_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21305..23068
DNA (1764bp) protein (588aa)
biotin carboxylase; K11263 acetyl-/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.3.4.14]
Biotin carboxylase., Pyruvate carboxylase {ECO:0000313|EMBL:AEA27403.1}; EC=6.3.4.14 {ECO:0000313|EMBL:AEA27403.1};; EC=6.4.1.1 {ECO:0000313|EMBL:AEA27403.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Biotin carboxylase., Pyruvate carboxylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTH8_PSEUX
Displaying items 1-30 of 96 in total

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