ggKbase home page

SCNpilot_cont_1000_p_scaffold_1041_curated_4

Organism: scnpilot_dereplicated_Pseudonocardia_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(5163..5522)

Top 3 Functional Annotations

Value Algorithm Source
ArsR family transcriptional regulator n=1 Tax=Nocardiopsis salina RepID=UPI000344AFF0 similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 111.0
  • Bit_score: 163
  • Evalue 1.00e-37
ArsR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 111.0
  • Bit_score: 160
  • Evalue 2.80e-37
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ADH67219.1}; TaxID=446468 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 111.0
  • Bit_score: 160
  • Evalue 1.20e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nocardiopsis dassonvillei → Nocardiopsis → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 360
GTGTCCCGCGACGAGTGTGAGCTGCTGTGCCTGGACCTCCCCCACGCGGAGGAGGTCCGCCGCCTGATGCCCGACGAGTCGCAGGCGACCGCGGCCGCCACGCAGGCCCGGGCGCTCGGCGACCCGACCCGGTTGCGGCTGGCGTCGGCCCTCGCGGTCGGGTCCGAGCTGTGTGTCTGCGATCTGGCGTGGGTGTGCGGTCTCGCCCAGAACCTGGTGTCGCACCACGTCCGCCAGCTGCGCTCGGCCGGTCTGGCCGCCTCGCGGCGCGACGGAAAGCTCGTGATGTACCGGCTCACCCCCGTCGGCGCAACGCTGCTGGAGGCAGTTCTGGGGGCGGGGGTGAGCACCCGTGAGTGA
PROTEIN sequence
Length: 120
VSRDECELLCLDLPHAEEVRRLMPDESQATAAATQARALGDPTRLRLASALAVGSELCVCDLAWVCGLAQNLVSHHVRQLRSAGLAASRRDGKLVMYRLTPVGATLLEAVLGAGVSTRE*