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SCNpilot_cont_1000_p_scaffold_1041_curated

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1041_curated_1
unknown

Not on your lists

comp(94..672)
DNA (579bp) protein (193aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1041_curated_2
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

846..2288
DNA (1443bp) protein (481aa)
Transposase IS66 n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2J5E9_FRASC
Transposase {ECO:0000313|EMBL:KJE19353.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
transposase IS66; K07484 transposase
SCNpilot_cont_1000_p_scaffold_1041_curated_3
Streptomyces zinciresistens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3146..5170)
DNA (2025bp) protein (675aa)
heavy metal translocating P-type ATPase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEBB6
Putative cadmium-transporting ATPase {ECO:0000313|EMBL:EGX58325.1}; TaxID=700597 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces zinciresistens K42.;"
heavy metal translocating p-type ATPase
SCNpilot_cont_1000_p_scaffold_1041_curated_4
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5163..5522)
DNA (360bp) protein (120aa)
ArsR family transcriptional regulator n=1 Tax=Nocardiopsis salina RepID=UPI000344AFF0
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ADH67219.1}; TaxID=446468 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;"
SCNpilot_cont_1000_p_scaffold_1041_curated_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5948..6661
DNA (714bp) protein (238aa)
Peptidase M23 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXF0_PSEUX
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:AEA26524.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1041_curated_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6707..7234
DNA (528bp) protein (176aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXE8_PSEUX
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AEA26522.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1041_curated_7
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7315..7962
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00036F5429
DSBA oxidoreductase {ECO:0000313|EMBL:AII11271.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
DSBA oxidoreductase
SCNpilot_cont_1000_p_scaffold_1041_curated_8
Rhodococcus sp. PML026, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7967..8608
DNA (642bp) protein (214aa)
vitamin K epoxide reductase (EC:1.1.4.1)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI000380C9F1
Uncharacterized protein {ECO:0000313|EMBL:KJV03619.1}; TaxID=1356405 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. PML026.;"
SCNpilot_cont_1000_p_scaffold_1041_curated_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8605..9231
DNA (627bp) protein (209aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXE5_PSEUX
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:AEA26519.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1041_curated_10
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9228..10082
DNA (855bp) protein (285aa)
cytochrome C biogenesis protein ResC n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDAD8
Cytochrome c biogenesis protein {ECO:0000313|EMBL:EIE99872.1}; Flags: Precursor;; TaxID=928724 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora glauca K62.;"
ccdA; cytochrome c-type biogenesis protein; K06196 cytochrome c-type biogenesis protein
SCNpilot_cont_1000_p_scaffold_1041_curated_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10085..10993)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWI9_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28681.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1041_curated_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11261..11971)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CY11_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23896.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1041_curated_13
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11968..12795)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Saccharomonospora azurea NA-128 RepID=H8GAW6_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EHY88652.1}; Flags: Precursor;; TaxID=882081 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea NA-128.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1041_curated_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12792..14546)
DNA (1755bp) protein (585aa)
cytochrome c oxidase subunit I; K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
Cytochrome c oxidase, subunit I n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSM4_PSEUX
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:AEA23734.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1041_curated_15
unknown

Not on your lists

comp(14578..14697)
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1041_curated_16
unknown

Not on your lists

comp(14809..15195)
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1041_curated_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15219..15824)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDD04
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23884.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1041_curated_18
Kytococcus sedentarius, Kytococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16181..16687
DNA (507bp) protein (169aa)
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=478801 species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Kytococcus.;" source="Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541); (Micrococcus sedentarius).;"
Lipoprotein signal peptidase n=1 Tax=Micromonospora sp. (strain L5) RepID=E8SBA9_MICSL
SCNpilot_cont_1000_p_scaffold_1041_curated_19
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16731..18248
DNA (1518bp) protein (506aa)
Polyprenol-phosphate-mannosyl transferase n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=D6X654_STRPR
Polyprenol-phosphate-mannosyl transferase {ECO:0000313|EMBL:EFH32089.1}; TaxID=457429 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;"
Polyprenol-phosphate-mannosyl transferase
SCNpilot_cont_1000_p_scaffold_1041_curated_20
Dermacoccus sp. Ellin185, Dermacoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18211..18948)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Dermacoccus sp. Ellin185 RepID=E3BAA8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EFP58017.1}; TaxID=188626 species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Dermacoccus.;" source="Dermacoccus sp. Ellin185.;"
putative integral membrane protein; K07238 zinc transporter, ZIP family
SCNpilot_cont_1000_p_scaffold_1041_curated_21
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18971..21163)
DNA (2193bp) protein (731aa)
Carbonic anhydrase {ECO:0000313|EMBL:EWC58798.1}; EC=4.2.1.1 {ECO:0000313|EMBL:EWC58798.1};; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
carbonic anhydrase (EC:4.2.1.1); K01673 carbonic anhydrase [EC:4.2.1.1]
carbonic anhydrase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFED64
SCNpilot_cont_1000_p_scaffold_1041_curated_22
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21405..23375
DNA (1971bp) protein (657aa)
Copper resistance protein CopD n=2 Tax=Saccharopolyspora erythraea RepID=T2RN62_SACER
copper resistance transporter; K02351 putative membrane protein; K07245 putative copper resistance protein D
Copper resistance protein CopD {ECO:0000313|EMBL:EQD81380.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
SCNpilot_cont_1000_p_scaffold_1041_curated_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23344..24294)
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDD03
cytochrome c oxidase caa3-type, assembly factor CtaG-like protein
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein {ECO:0000313|EMBL:AEA26527.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1041_curated_24
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24291..26543)
DNA (2253bp) protein (751aa)
ctpA; cation-transporting ATPase (EC:3.6.3.-); K12949 cation-transporting P-type ATPase A/B [EC:3.6.3.-]
Cation-transporting ATPase n=2 Tax=Saccharopolyspora erythraea RepID=A4FP15_SACEN
Cation-transporting ATPase {ECO:0000313|EMBL:KGI80372.1}; TaxID=414996 species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;"
SCNpilot_cont_1000_p_scaffold_1041_curated_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26684..27259
DNA (576bp) protein (192aa)
Copper resistance protein CopC n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIL7_PSEUX
copper resistance protein CopC; K07156
Copper resistance protein CopC {ECO:0000313|EMBL:AEA22414.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1041_curated_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27263..27607)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE6E9
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AEA26379.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1041_curated_27
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27850..28752)
DNA (903bp) protein (301aa)
cation diffusion facilitator family transporter n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE023
cation diffusion facilitator family transporter; K03295 cation efflux system protein, CDF family
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ACQ81738.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_cont_1000_p_scaffold_1041_curated_28
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28839..29582)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CY07_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI00067.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
SCNpilot_cont_1000_p_scaffold_1041_curated_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29605..29820)
DNA (216bp) protein (72aa)
Cobalt transporter subunit CbtB putative n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CY08_PSEUX
cobalt transporter subunit CbtB
Cobalt transporter subunit CbtB putative {ECO:0000313|EMBL:AEA23893.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1041_curated_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29871..30515
DNA (645bp) protein (215aa)
Phosphoglycerate mutase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ55_PSEUX
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:AEA27251.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Displaying items 1-30 of 60 in total

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