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SCNpilot_cont_300_bf_scaffold_169_curated

Search features with annotation key words

Displaying items 1-30 of 723 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_169_curated_1
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

538..2619
DNA (2082bp) protein (694aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003805BC7
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:ACK52191.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_300_bf_scaffold_169_curated_2
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2616..3554)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00036DB5F6
glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain
Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain {ECO:0000313|EMBL:CCJ05477.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_cont_300_bf_scaffold_169_curated_3
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3567..4373
DNA (807bp) protein (269aa)
HhH-GPD family protein; K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
HhH-GPD family protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UDT4_METS4
HhH-GPD family protein {ECO:0000313|EMBL:ACA19207.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_300_bf_scaffold_169_curated_4
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4430..5122
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036DF058
phospholipase/carboxylesterase
Phospholipase/Carboxylesterase {ECO:0000313|EMBL:CCJ06548.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_cont_300_bf_scaffold_169_curated_5
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5119..5853)
DNA (735bp) protein (245aa)
methyltransferase type 11 n=1 Tax=Methylosinus sp. LW4 RepID=UPI000377012C
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ACB94084.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_300_bf_scaffold_169_curated_6
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6060..6830
DNA (771bp) protein (257aa)
hydroxyacylglutathione hydrolase (EC:3.1.2.6); K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6]
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00037ED16D
SCNpilot_cont_300_bf_scaffold_169_curated_7
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6840..7283
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RSJ0_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCD84917.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
SCNpilot_cont_300_bf_scaffold_169_curated_8
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7359..9140
DNA (1782bp) protein (594aa)
diguanylate cyclase n=1 Tax=Methylocystis parvus RepID=UPI0002F4F976
Diguanylate cyclase {ECO:0000313|EMBL:EJW12869.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
diguanylate cyclase/phosphodiesterase
SCNpilot_cont_300_bf_scaffold_169_curated_9
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9161..9784)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00037B992C
polyhydroxyalkonate synthesis repressor PhaR
Polyhydroxyalkonate synthesis repressor, PhaR {ECO:0000313|EMBL:ACB94081.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_300_bf_scaffold_169_curated_10
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10042..11217
DNA (1176bp) protein (392aa)
Putative acyltransferase {ECO:0000313|EMBL:EHK74115.1}; EC=2.3.1.9 {ECO:0000313|EMBL:EHK74115.1};; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
phbA; acetyl-CoA acetyltransferase (EC:2.3.1.9)
acetyl-CoA acetyltransferase n=1 Tax=Rhizobium meliloti RepID=UPI0003703D13
SCNpilot_cont_300_bf_scaffold_169_curated_11
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11302..12027
DNA (726bp) protein (242aa)
phbB; acetoacetyl CoA reductase; K00023 acetoacetyl-CoA reductase [EC:1.1.1.36] rbh
Acetoacetyl CoA reductase n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89NV8_BRADU
Acetoacetyl CoA reductase {ECO:0000313|EMBL:BAC48990.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_cont_300_bf_scaffold_169_curated_12
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12174..12584
DNA (411bp) protein (137aa)
50S ribosomal protein L19 n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=RL19_AZOC5
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19
50S ribosomal protein L19 {ECO:0000255|HAMAP-Rule:MF_00402}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_300_bf_scaffold_169_curated_13
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12647..13060)
DNA (414bp) protein (138aa)
Glyoxalase family protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JAQ8_OLICO
glyoxalase family protein
Glyoxalase/bleomycin resistance {ECO:0000313|EMBL:AEI04976.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_300_bf_scaffold_169_curated_14
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13159..13923)
DNA (765bp) protein (255aa)
Transcriptional regulator, IclR family n=1 Tax=Rhodovulum sp. PH10 RepID=J9DTD9_9RHOB
Transcriptional regulator, IclR family {ECO:0000313|EMBL:EJW09692.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
transcriptional regulator family protein 2
SCNpilot_cont_300_bf_scaffold_169_curated_15
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14133..15116
DNA (984bp) protein (328aa)
Periplasmic protein n=1 Tax=Rhodovulum sp. PH10 RepID=J9DEG8_9RHOB
Periplasmic protein {ECO:0000313|EMBL:EJW09691.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
SCNpilot_cont_300_bf_scaffold_169_curated_16
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15150..16181
DNA (1032bp) protein (344aa)
Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family n=1 Tax=Rhodovulum sp. PH10 RepID=J9A1R2_9RHOB
Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family {ECO:0000313|EMBL:EJW09690.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
CobW/HypB/UreG, nucleotide-binding domain-containing protein 1
SCNpilot_cont_300_bf_scaffold_169_curated_17
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16209..17594
DNA (1386bp) protein (462aa)
amidohydrolase; K01465 dihydroorotase [EC:3.5.2.3]
Dihydroorotase n=1 Tax=Rhodovulum sp. PH10 RepID=J9DX68_9RHOB
Dihydroorotase {ECO:0000313|EMBL:EJW09689.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
SCNpilot_cont_300_bf_scaffold_169_curated_18
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17616..18398
DNA (783bp) protein (261aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodovulum sp. PH10 RepID=J9DDQ6_9RHOB
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EJW09688.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
binding-protein-dependent transport systems inner membrane component; K02050 NitT/TauT family transport system permease protein
SCNpilot_cont_300_bf_scaffold_169_curated_19
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18395..19183
DNA (789bp) protein (263aa)
ATPase n=1 Tax=Rhodovulum sp. PH10 RepID=J9DTD5_9RHOB
ATPase {ECO:0000313|EMBL:EJW09687.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_169_curated_20
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19427..20698
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Bacillus sp. L1(2012) RepID=UPI00034C6111
Uncharacterized protein {ECO:0000313|EMBL:KIL35958.1}; TaxID=1590652 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846.;"
cbaA; 3-chlorobenzoate-3,4-dioxygenase oxygenase subunit
SCNpilot_cont_300_bf_scaffold_169_curated_21
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20725..21720
DNA (996bp) protein (332aa)
4,5-dihydroxyphthalate decarboxylase id=2013961 bin=GWD2_Deltaproteobacteria_55_8 species=Anaerobaculum mobile genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
4,5-dihydroxyphthalate decarboxylase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
SCNpilot_cont_300_bf_scaffold_169_curated_22
unknown

Not on your lists

21833..22309
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_169_curated_23
bacterium YEK0313, Bacteria

Not on your lists

comp(22316..23104)
DNA (789bp) protein (263aa)
Putative enoyl-CoA hydratase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IAF2_AZOC5
Putative enoyl-CoA hydratase {ECO:0000313|EMBL:CEJ15071.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
enoyl-CoA hydratase
SCNpilot_cont_300_bf_scaffold_169_curated_24
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23101..24234)
DNA (1134bp) protein (378aa)
FAD dependent oxidoreductase n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QKP1_RHOPT
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ACF03138.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCNpilot_cont_300_bf_scaffold_169_curated_25
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24464..25468
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MND4_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
SCNpilot_cont_300_bf_scaffold_169_curated_26
bacterium YEK0313, Bacteria

Not on your lists

comp(25585..27027)
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003677053
Porin omp2b {ECO:0000313|EMBL:CEJ13598.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
porin
SCNpilot_cont_300_bf_scaffold_169_curated_27
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27392..28624)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI000313823A
Uncharacterized protein {ECO:0000313|EMBL:EKS36104.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_169_curated_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28768..29268
DNA (501bp) protein (167aa)
Acyl dehydratase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YW77_9RHIZ
Acyl dehydratase {ECO:0000313|EMBL:KFC67557.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
dehydratase
SCNpilot_cont_300_bf_scaffold_169_curated_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29273..30142
DNA (870bp) protein (290aa)
citrate (pro-3S)-lyase; K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34]
Citrate (Pro-3S)-lyase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UEN4_METS4
Uncharacterized protein {ECO:0000313|EMBL:KFC67558.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_300_bf_scaffold_169_curated_30
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30146..31111)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J3BYG5_9RHIZ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Displaying items 1-30 of 723 in total

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