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SCNpilot_cont_300_bf_scaffold_105_curated_1

Organism: scnpilot_dereplicated_Rhizobiales_2

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 20..508

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIB4_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 65.3
  • Coverage: 147.0
  • Bit_score: 190
  • Evalue 1.10e-45
RND efflux system, outer membrane lipoprotein, NodT similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 147.0
  • Bit_score: 190
  • Evalue 3.40e-46
RND efflux system, outer membrane lipoprotein, NodT {ECO:0000313|EMBL:ABE64033.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 147.0
  • Bit_score: 190
  • Evalue 1.50e-45

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGTCGCAATTGTTCTCGCCGGGCATGGGGGTTTGGGGCATCGCCGGCAATCTGGCGCAGACGGTGTTTGACGCGGGCGCTTTGGCCGCCAAGCAGCAGGGCGCCGAGGAGGCGACCTTGCAGGCGGCGGCGCAATATCGCTCGACGGTTCTGATTGCCTTCCAGAATGTCGCCGATACGCTGCGCGCCTTGCAGAGCGATGCGCGGGCGCTGAATGCGGCGATCGCGGCGGAACGCTCGGCGGCGCAGAACAACGATCTGGTGCGCAAACAGGTGGAGGCCGGCCAGATCAGCCTGCCGCTGCTGCTGGCCGCCCAGCAAGCCTATCTGCAGACCGCCTTGGCGCGGGTGCAGGCGGAGGGCCAGCGCGTCACCGATACGATTGCTTTGTTCCAGGCTTTGGGTGGCGGCTGGTGGAATCGTCCAGGTCCGCTCGTCCCACCCGTCGTACCCGCCGATCCCACAGCCCAGACCGTCGCCGCGAATTAA
PROTEIN sequence
Length: 163
MSQLFSPGMGVWGIAGNLAQTVFDAGALAAKQQGAEEATLQAAAQYRSTVLIAFQNVADTLRALQSDARALNAAIAAERSAAQNNDLVRKQVEAGQISLPLLLAAQQAYLQTALARVQAEGQRVTDTIALFQALGGGWWNRPGPLVPPVVPADPTAQTVAAN*