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SCNpilot_cont_300_bf_scaffold_87_curated_1671

Organism: scnpilot_dereplicated_Rhizobiales_2

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(1825634..1826371)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 246.0
  • Bit_score: 347
  • Evalue 4.30e-93
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 246.0
  • Bit_score: 347
  • Evalue 1.90e-92
tRNA pseudouridine synthase A n=1 Tax=Methylocystis parvus RepID=UPI0002FEE3E1 similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 245.0
  • Bit_score: 357
  • Evalue 1.00e-95

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Taxonomy

Methylocystis sp. SC2 → Methylocystis → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGCCGCGCTACAAGCTCACCATCGAATATGACGGCACGCCGTTCGCAGGCTGGCAGCGACAAGCCAATGCGCCTTCCGTGCAGCAGGCGCTGGAAGAAGCAGTCTTCGCCATGAGTAGCGAAACCGTCGTCGTGCATGGCGCCGGACGCACCGATGCCGGCGTTCACGCCATCGCGCAGGTGGCGCATATCGATCTGTCGCGTGAGTGGCGCACCGACAAGATCCGCGATGCGATGAACGCACATCTGAAGCCGCAGCCGGTCGCCGTGCTGCAAGCGGAGGCCGTGGACGATACGTTCGAAGCGCGCTTTTCCGCCACGGCACGTCACTATGTCTATCGCATCTTGAACCGCCGCGCGCCGCCAACCGTGATGCGCGATGGCGTGTGGCATGTAATGCGGCGCGTGGACGCCGAAGCCATGCATGAGGCGGCGCAGGTGCTGATCGGCAAGCACGATTTCAGTACGTTTCGCGCGGCCGAATGCCAGGCCAATTCACCGCTGCGCACGCTCGACAAGCTCGATGTCGTGCGCAACGGCGACATGATCGAAATTTTCGCTTCGGCGCGCTCGTTCCTGCACCATCAAGTGCGCTCGATCACTGGCTCGCTCGAACATGTCGGCTCGGGCAAATGGACCAAGCAGGATTTGAAGGACGCGCTGGAGTCCAAGGATCGCGCCCGCTGCGGCATGGTCGCGCCGCCGAATGGACTGTATCTGCTGCGCGTGGATTATTGA
PROTEIN sequence
Length: 246
MPRYKLTIEYDGTPFAGWQRQANAPSVQQALEEAVFAMSSETVVVHGAGRTDAGVHAIAQVAHIDLSREWRTDKIRDAMNAHLKPQPVAVLQAEAVDDTFEARFSATARHYVYRILNRRAPPTVMRDGVWHVMRRVDAEAMHEAAQVLIGKHDFSTFRAAECQANSPLRTLDKLDVVRNGDMIEIFASARSFLHHQVRSITGSLEHVGSGKWTKQDLKDALESKDRARCGMVAPPNGLYLLRVDY*