ggKbase home page

SCNpilot_cont_300_bf_scaffold_87_curated_1686

Organism: scnpilot_dereplicated_Rhizobiales_2

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 1839009..1839917

Top 3 Functional Annotations

Value Algorithm Source
LysR-family transcriptional regulator n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V8N8_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 38.9
  • Coverage: 301.0
  • Bit_score: 232
  • Evalue 6.00e-58
LysR-family transcriptional regulator {ECO:0000313|EMBL:EAQ05469.1}; TaxID=314232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella vestfoldensis SKA53.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.9
  • Coverage: 301.0
  • Bit_score: 232
  • Evalue 8.40e-58
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 35.1
  • Coverage: 302.0
  • Bit_score: 194
  • Evalue 5.70e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Loktanella vestfoldensis → Loktanella → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
TTGCGCATCAAACTCCGGCATGTGGAAGTTCTGATCGCTTTGTCCGAGACGGGCAGCATCAGAGCTGCGGCGCGGCTGCTGCGACTGAGCCAGCCGGCTTTGAGCAAGGTCATTCGCCAGATGGAGAATGACTTCAACGTGCCCTTGATCGCGCGCACCCCACGCGGCGCCATTCTGACGGAATTCGGACAGACCATCCTCGCCCATGCGCGCGTCGTTCAAGCCGATGTGCGTCGCCTTGAGGATGAGATCGATCGGTTGCGCGGCCGTCAGAAGGGAACGATCACCGTGGCGGTTTCGCCGCTGGCATCGACCTTGATCATTCCCGCGGTTCTTCCGCCTTTCTGCGCGAAATATGCCGATATCGAGGTGAAAATATCGGAAGGCATCTATCCGCCGGTCTTGGCGCCACTCCGTGATGGTCTGATCGACTTTGCTGTCGGTCCCGCACCGCCGGCATTTCTCGCTGCTGAGCTGGATGTCGAAATTCTGCTCGAGACGGAGATCGTCGTGACGGGGCGGTTCGATCATCCCGCGAAAAAAGCCAAGTCCCTCCGGGATTTGACAAAGAGAAACTGGCTGACCTTGGGGCCGGCCGGCAGTCTGGGCGAGCTGTTCGTAGAAGCATTTGAAACCCGTGGTCTCAAGCCGCCTCGCACGACGATCAAATCGGAATCTTTCGCTACGGCGTTGGCTTTGGTCGAAGCAACCGACTTCCTCGTTGTCTTACCGCGGAAACTGGTTGCACCGCTGCAAGCGCAAAAGCGCCTGCAAGCGATAGAACTGGAAGATGAACTGCCGAAATCGCGGATCGCGCTGAGCAAGCGTTCGACCATCCCGCTGTCGCCAGCCGCGCAACATCTTTCAACGCTGATCCGCCGCCGCGCCTCCGCACTAGCCCGTAGCTAG
PROTEIN sequence
Length: 303
LRIKLRHVEVLIALSETGSIRAAARLLRLSQPALSKVIRQMENDFNVPLIARTPRGAILTEFGQTILAHARVVQADVRRLEDEIDRLRGRQKGTITVAVSPLASTLIIPAVLPPFCAKYADIEVKISEGIYPPVLAPLRDGLIDFAVGPAPPAFLAAELDVEILLETEIVVTGRFDHPAKKAKSLRDLTKRNWLTLGPAGSLGELFVEAFETRGLKPPRTTIKSESFATALALVEATDFLVVLPRKLVAPLQAQKRLQAIELEDELPKSRIALSKRSTIPLSPAAQHLSTLIRRRASALARS*