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SCNpilot_cont_300_bf_scaffold_1358_curated_19

Organism: scnpilot_dereplicated_Rhizobiales_2

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 13776..16223

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 87.9
  • Coverage: 826.0
  • Bit_score: 1436
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 826.0
  • Bit_score: 1436
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Methyloferula stellata RepID=UPI00037E4BC5 similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 818.0
  • Bit_score: 1442
  • Evalue 0.0

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Taxonomy

Beijerinckia indica → Beijerinckia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2448
GTGCATCCGACGCACTATGGCCGTATCTGCCCGATTGAGACGCCGGAAGGCCCGAACATCGGTCTGATCAACTCGCTGGCGACCTTCGCCCGCGTCAACAAGTATGGCTTCATCGAAGCGCCGTATCGCAAGGTGCACGACGGTCACGTGACCGAAGACGTGGCTTATCTGTCGGCGATGGAAGAGCAGAAGCACTACGTCGCGCAGGCCAATGTCGTCGTCGACGGCAAGGGTCAGCTGACGGAAGATCTGATCGTCTGCCGCCACGCGGGTGACGTCATCATGGTGCCGCGCGATCGCGTCGACTACATGGACGTGTCGCCGAAGCAGCTCGTTTCGGTCGCCGCGGCGCTGATCCCGTTCCTTGAGAACGACGACGCCAACCGCGCGCTCATGGGCTCGAACATGCAGCGTCAGGCCGTGCCGCTGGTGCGCACCGACGCGCCGCTGGTCGGCACCGGCATGGAAAGCGTCGTGGCGCGCGACTCGGGCGCCGCGATCGCGGCTCGCCGTACGGGCTTCATCGATCAGATCGATGCGACCCGTATCGTTATCCGCGCGACGGAAGATCTCGATGCGGCTCGTCCCGGCGTCGACATCTACCGCCTGATGAAGTTCCAGCGTTCGAACCAGTCGACCTGTATCAACCAGAAGCCTCTGGTGAAGGTGGGCGACTTCGTGCGCAAGGGCGACATCATCGCCGACGGTCCCTCGACCGATCTCGGCGATCTGGCGCTCGGCCGCAACGTGCTCGTCGCGTTCATGCCGTGGAACGGCTACAACTTCGAAGACTCGATCCTGCTCAACGAACGCATCGTCAAGGACGACGTGTTCACGTCGATCCACATCGACGAATTCGAAGTGATGGCCCGCGACACCAAGCTTGGTCCCGAGGAAATCACCCGCGACATTCCGAACGTTTCGGAAGAAGCGCTGAAGAACCTCGACGAAGCCGGTATCGTCTACATCGGTGCGGAAGTGCAGGCGGGTGACATTCTCGTCGGCAAGATCACGCCGAAGGGCGAAAGCCCGATGACGCCGGAAGAGAAGCTCTTGCGCGCCATCTTCGGCGAGAAGGCTTCGGACGTGCGCGACACCTCGCTGCGGGTGCCGCCGGGCGTCCAGGGCACGATCGTCGAAGTGCGCGTGTTCAACCGCCACGGCGTCGACAAGGACGAGCGTGCGCAGGCGATCGAGCGTGAAGAGATCGAACGTCTCGCCAAGGACCGCGACGACGAACAGGCGATCCTCGACCGTAACGTCTATGGCCGCCTGTCGGAAATGCTGGGTGGCAAGAAGGCGATCAGCGGCCCGAAGGGCTTCAAGAAGGAAAGCGTGCTGACGCGTGAGACCTTCGAGGAGTATCCGCGCTCGCAATGGTGGACGTTCGCCGTCGAAGACGATCACCTGATGGGTGAGATCGAGGCGATGCGCAAGCAGTACGACGAGGCGAAGAAGGGGCTGGAAAGCCGCTTCCTCGACAAGGTCGAGAAGCTGCAGCGCGGTGACGAACTGCCGCCGGGCGTGATGAAGATGGTCAAGGTCTTCGTCGCTGTGAAGCGCAAGATCCAGCCGGGCGACAAGATGGCCGGCCGTCACGGCAACAAGGGTGTCGTGTCCAAGATCGTTCCGACCGAGGACATGCCGTTCCTGCCGGATGGCACTGCTGTCGACATCGTGCTGAACCCACTCGGCGTGCCGAGCCGCATGAACGTCGGTCAGATTCTCGAAACCCATCTGGGTTGGGCTTGCGCCGGTCTCGGCAAGCAGGTCGGCGAGACGGTGAATGCCTATCTTCGCGATGGCAACGTCAAGCCGCTGCGCGACAAGCTCGGCGAGATCTACGGCAAGGATGAGACCGTCAAGTCGCTCGACGACAAGTCGCTGGTCGAACTCGGCCAGAACCTGCGTCGCGGCGTTCCGATCGCCACGCCCGTCTTCGACGGCGCGCGCGAGAAGGACATCGTCGAGATGCTGGGCCAGGCCGGTTTGGCATCGTCGGGGCAGGTGACGCTGTTCGACGGCCGCACCGGCGAGGCTTTCGATCGCCAGGTGACTGTCGGCTACATCTACATGCTGAAGCTGCATCACCTTGTCGACGACAAGATCCATGCCCGTTCGATCGGCCCATACTCGCTCGTCACCCAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGTGGCCAGCGCTTCGGCGAAATGGAGGTGTGGGCGCTCGAGGCTTACGGCGCGGCTTACACCTTGCAGGAGATGCTGACGGTGAAATCCGACGACGTCGCCGGCCGTACCAAGGTCTACGAGGCGATCGTGCGCGGCGATGACGCGTTCGAAAGCGGCATTCCGGAGAGCTTCAACGTGCTCGTCAAGGAAATGCGCTCGCTCGGCCTCAACGTGGAACTGGCCGCGACGAAGAAGATCGAGGGTTCGACGACGGCGGAAGCCGCGGAATAA
PROTEIN sequence
Length: 816
VHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIEAPYRKVHDGHVTEDVAYLSAMEEQKHYVAQANVVVDGKGQLTEDLIVCRHAGDVIMVPRDRVDYMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRTDAPLVGTGMESVVARDSGAAIAARRTGFIDQIDATRIVIRATEDLDAARPGVDIYRLMKFQRSNQSTCINQKPLVKVGDFVRKGDIIADGPSTDLGDLALGRNVLVAFMPWNGYNFEDSILLNERIVKDDVFTSIHIDEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVQAGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVQGTIVEVRVFNRHGVDKDERAQAIEREEIERLAKDRDDEQAILDRNVYGRLSEMLGGKKAISGPKGFKKESVLTRETFEEYPRSQWWTFAVEDDHLMGEIEAMRKQYDEAKKGLESRFLDKVEKLQRGDELPPGVMKMVKVFVAVKRKIQPGDKMAGRHGNKGVVSKIVPTEDMPFLPDGTAVDIVLNPLGVPSRMNVGQILETHLGWACAGLGKQVGETVNAYLRDGNVKPLRDKLGEIYGKDETVKSLDDKSLVELGQNLRRGVPIATPVFDGAREKDIVEMLGQAGLASSGQVTLFDGRTGEAFDRQVTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDAFESGIPESFNVLVKEMRSLGLNVELAATKKIEGSTTAEAAE*