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SCNpilot_cont_300_bf_scaffold_87_curated_6

Organism: scnpilot_dereplicated_Rhizobiales_2

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 5952..6887

Top 3 Functional Annotations

Value Algorithm Source
Putative Bug-like extracytoplasmic solute binding receptor, TTT family n=1 Tax=Variovorax paradoxus B4 RepID=T1X4Y9_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 42.3
  • Coverage: 312.0
  • Bit_score: 264
  • Evalue 1.50e-67
putative Bug-like extracytoplasmic solute binding receptor, TTT family similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 312.0
  • Bit_score: 264
  • Evalue 4.60e-68
Putative Bug-like extracytoplasmic solute binding receptor, TTT family {ECO:0000313|EMBL:AGU47982.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.3
  • Coverage: 312.0
  • Bit_score: 264
  • Evalue 2.10e-67

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGAGCCTGCCGCTCGCAGGCACCGCGATGGGGCAAAACTATCCGAACAATAACGTTCGCCTGATCGTACCCTTTCCTCCTGCCGGCGCGACCGACATCACCGCGCGCCTGGTCGCCAATCAGCTTTCCAAGCAATGGGGCCAGACCGTCATTGTCGAAAACCGCACGGGCGCGAGCGGCGTGATCGGCAGCGAGGCCGTCGCCCGCGCGCCGGCCGATGGCTACACGTTGTTGCTCGGCACGCTGGCTGGCAACGTGATGACCCATCTGCTGCGCGACAAGGTGCCGTATGGGCGCGACGCCTTCATCCCGATCACCGTCCTCGGGCAAACGCCGAATGTTCTGCTTGCCAGCAGCGCCCTGCCCGTCAAGACGCTCAAGGAACTGATCGACTACGCCAAGGCCCATCCCGGCAAGGTCCGCTACGGCTCAGCCGGCATAGGGCTGTCCGGCCATCTCGGCGTGGCGCTCTTCGCCGAAGAAGCCAAGATCGATCTGATCCATGTGCCCTATCGCGGCAGCGCGCCGTCGGTCGAAGCTTTCTCGCGCGGCGAGGTGGAGTTGACACTGGCCCTGGTGCCCGAGGCGGCGAACTCGATGAAGAGCACGCCCGGCGTCACGCCGATTGCGATCGCCGCGGCGAAACGCTCCGATAAATTTCCCGACACGCCAACTTTCGCCGAACTCGGCTATCCCAATATCCAGGTCTATGCGCTGAGCGGGCTGATGGTGCCGAAAGGCACGCCGCAGCCAATCGTCGATAAGATCCACAAGGACACGGTCATCGCGCTGAAGGATCCGGCCGTGGTCGAGCGCATGAACAGTCTCGGCATCGATCCGGTCGGCTCGACGCCGGCCGAATTCGACAAACTGTTGAATGACGAATTCGCCCGCTGGGAACCGCTGATCCGCAGCAAAGGCATCAAGGCCGAATAG
PROTEIN sequence
Length: 312
MSLPLAGTAMGQNYPNNNVRLIVPFPPAGATDITARLVANQLSKQWGQTVIVENRTGASGVIGSEAVARAPADGYTLLLGTLAGNVMTHLLRDKVPYGRDAFIPITVLGQTPNVLLASSALPVKTLKELIDYAKAHPGKVRYGSAGIGLSGHLGVALFAEEAKIDLIHVPYRGSAPSVEAFSRGEVELTLALVPEAANSMKSTPGVTPIAIAAAKRSDKFPDTPTFAELGYPNIQVYALSGLMVPKGTPQPIVDKIHKDTVIALKDPAVVERMNSLGIDPVGSTPAEFDKLLNDEFARWEPLIRSKGIKAE*