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SCNpilot_cont_300_bf_scaffold_73_curated

Search features with annotation key words

Displaying items 31-60 of 298 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_73_curated_31
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33854..34561)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2WDC0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KHD07968.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
SCNpilot_cont_300_bf_scaffold_73_curated_32
unknown

Not on your lists

comp(34569..35021)
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_73_curated_33
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35025..35888)
DNA (864bp) protein (288aa)
ATPase involved in chromosome partitioning n=1 Tax=Rhizobium sp. AP16 RepID=J2CU46_9RHIZ
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:EJK80619.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
chromosome partitioning ATPase
SCNpilot_cont_300_bf_scaffold_73_curated_34
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36719..37768
DNA (1050bp) protein (350aa)
Putative substrate-binding component of ABC transporter n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QF75_RHOPT
ABC transporter substrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein
Putative substrate-binding component of ABC transporter {ECO:0000313|EMBL:ACE99509.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCNpilot_cont_300_bf_scaffold_73_curated_35
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37770..38570
DNA (801bp) protein (267aa)
ABC transporter related n=2 Tax=Rhodopseudomonas palustris RepID=B3QF74_RHOPT
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CAE26327.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCNpilot_cont_300_bf_scaffold_73_curated_36
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38572..39429
DNA (858bp) protein (286aa)
ABC transporter, permease n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6NBE6_RHOPA
ABC transporter permease {ECO:0000313|EMBL:KIZ35811.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
ABC transporter permease; K02050 NitT/TauT family transport system permease protein rbh
SCNpilot_cont_300_bf_scaffold_73_curated_37
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39444..41114)
DNA (1671bp) protein (557aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QI05_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64142.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_73_curated_38
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41312..42325
DNA (1014bp) protein (338aa)
KpsF/GutQ family protein; K06041 arabinose-5-phosphate isomerase [EC:5.3.1.13]
KpsF/GutQ family protein {ECO:0000313|EMBL:ABD86340.1}; EC=5.3.1.13 {ECO:0000313|EMBL:ABD86340.1};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
KpsF/GutQ family protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21B96_RHOPB
SCNpilot_cont_300_bf_scaffold_73_curated_39
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42338..42562)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QH26_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64471.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_73_curated_40
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42716..44626)
DNA (1911bp) protein (637aa)
AMP-dependent synthetase and ligase; K01908 propionyl-CoA synthetase [EC:6.2.1.17]
Propionyl-CoA synthetase {ECO:0000313|EMBL:ABE64472.1}; EC=6.2.1.17 {ECO:0000313|EMBL:ABE64472.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Propionyl-CoA synthetase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QH25_NITHX
SCNpilot_cont_300_bf_scaffold_73_curated_41
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44944..45747)
DNA (804bp) protein (268aa)
3-oxoacyl-ACP reductase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036E6E29
putative short-chain dehydrogenase
Short-chain alcohol dehydrogenase like protein {ECO:0000313|EMBL:EHR06191.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
SCNpilot_cont_300_bf_scaffold_73_curated_42
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45924..47225
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PFA0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41292.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K03699 putative hemolysin
SCNpilot_cont_300_bf_scaffold_73_curated_43
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47369..47740)
DNA (372bp) protein (124aa)
Blr1303 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89UV6_BRADU
Uncharacterized protein {ECO:0000313|EMBL:KIZ36376.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_73_curated_44
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47737..49869)
DNA (2133bp) protein (711aa)
C4-dicarboxylate ABC transporter n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034C5582
TRAP transporter, 4TM/12TM fusion protein {ECO:0000313|EMBL:EKS34221.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
TRAP transporter, 4TM/12TM fusion protein
SCNpilot_cont_300_bf_scaffold_73_curated_45
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50002..50949)
DNA (948bp) protein (316aa)
C4-dicarboxylate ABC transporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037B4429
putative TRAP-type uncharacterized transport system; K07080
Putative TRAP-type uncharacterized transport system {ECO:0000313|EMBL:BAL79680.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCNpilot_cont_300_bf_scaffold_73_curated_46
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51427..52632
DNA (1206bp) protein (402aa)
diguanylate phosphodiesterase n=1 Tax=Afipia birgiae RepID=UPI0002D9C72E
Uncharacterized protein {ECO:0000313|EMBL:EKS33320.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
response regulator receiver/diguanylate phosphodiesterase
SCNpilot_cont_300_bf_scaffold_73_curated_47
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52669..53151)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07I45_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ08389.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_cont_300_bf_scaffold_73_curated_48
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53522..53824
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IRY6_RHOP2
hypothetical protein
Signal peptide protein {ECO:0000313|EMBL:KIZ39024.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
SCNpilot_cont_300_bf_scaffold_73_curated_49
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53852..55051)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR98_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61249.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_73_curated_50
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55099..55728)
DNA (630bp) protein (210aa)
Blr1297 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89UW2_BRADU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAR56260.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
SCNpilot_cont_300_bf_scaffold_73_curated_51
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55997..57016
DNA (1020bp) protein (340aa)
Probable oxidoreductase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GFZ9_9BRAD
NADP-dependent oxidoreductase {ECO:0000313|EMBL:KIZ47539.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
oxidoreductase
SCNpilot_cont_300_bf_scaffold_73_curated_52
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57146..58270
DNA (1125bp) protein (375aa)
Putative chemotaxis sensory transducer n=2 Tax=Oligotropha carboxidovorans RepID=F8BNC4_OLICM
putative chemotaxis sensory transducer
Putative chemotaxis sensory transducer {ECO:0000313|EMBL:AEI06658.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_300_bf_scaffold_73_curated_53
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58373..59305
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HE69_9BRAD
hypothetical protein
Tax=RBG_16_Gamma2_60_9_curated
SCNpilot_cont_300_bf_scaffold_73_curated_54
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59339..60343)
DNA (1005bp) protein (335aa)
2-nitropropane dioxygenase (EC:1.13.12.16); K00459 nitronate monooxygenase [EC:1.13.12.16]
nitronate monooxygenase n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003677202
Nitronate monooxygenase {ECO:0000313|EMBL:KJC42329.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
SCNpilot_cont_300_bf_scaffold_73_curated_55
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60667..62001
DNA (1335bp) protein (445aa)
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034A07DC
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIZ45154.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
urea short-chain amide or branched-chain amino acid uptake ABC transporter periplasmic solute-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein rbh
SCNpilot_cont_300_bf_scaffold_73_curated_56
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62012..63706
DNA (1695bp) protein (565aa)
urea ABC transporter permease n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B4EF6B
Urea ABC transporter permease {ECO:0000313|EMBL:KJC54579.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
SCNpilot_cont_300_bf_scaffold_73_curated_57
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63706..64872
DNA (1167bp) protein (389aa)
amino acid ABC transporter permease n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000349868F
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
Inner-membrane translocator {ECO:0000313|EMBL:ABE40731.1}; Flags: Precursor;; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_300_bf_scaffold_73_curated_58
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64877..65641
DNA (765bp) protein (255aa)
urea ABC transporter ATP-binding protein n=1 Tax=Afipia birgiae RepID=UPI0003692A0E
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ABD89234.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_300_bf_scaffold_73_curated_59
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65645..66340
DNA (696bp) protein (232aa)
ABC transporter related n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IZ54_RHOP2
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ABD06506.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_300_bf_scaffold_73_curated_60
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66620..70219
DNA (3600bp) protein (1200aa)
urea amidolyase (EC:6.3.4.6); K01941 urea carboxylase [EC:6.3.4.6]
Urea amidolyase n=1 Tax=Cellvibrio sp. BR RepID=I3I864_9GAMM
Urea carboxylase {ECO:0000313|EMBL:EZQ19719.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
Displaying items 31-60 of 298 in total

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