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SCNpilot_cont_300_bf_scaffold_516_curated_7

Organism: scnpilot_dereplicated_Rhizobiales_3

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38
Location: comp(6160..6792)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Afipia sp. 1NLS2 RepID=D6V466_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 210.0
  • Bit_score: 384
  • Evalue 8.60e-104
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFI52746.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.0
  • Coverage: 210.0
  • Bit_score: 384
  • Evalue 1.20e-103
FecI-like sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 211.0
  • Bit_score: 247
  • Evalue 3.00e-63

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGACCGAGCGAAACGGTCGCCCGCCGCTGCTTAGGCTCGTCGGCAGCGACGGTGACGCCGCACCTGCCGTTCCCGAGCCCACCGCCCGTGACACCGACTGGGCGATCCTGATGGCCCATGCCCAGGACGGCGACAGGTCGGCCTACCAGCGCTTGCTGCAGGAGATCACGCCGTATCTGCGCTCGCTGGCGGCACGCCGGCATCGCGATCCGAGCGACATCGAGGACGCGGTGCAGGACATCCTGCTGACCGTCCACGCGATCCGGCATACGTTCGATCCGACCAGGCCATTCGGTCCGTGGCTCGTGACGATCGCGAACCGGCGGTTCATCGACCGGCTCCGACGGCAGGGGCGCAGGCGCAACCGGGAAACCCCGCTGACGCCCGAGCATGAAACCTTCGCCGAACCTCAGGCGAACCTTGAAGAGACACCCGACAGACGCGAACTCGAAAAGGCGATCGACGAGCTTTCCCCCATGCAGCGCAAGGCAATACAACTACTCAAGCTCAAGGAGATGTCGTTGAGGGAGGCCTCGACGGCGAGCGGAATGTCCATCGCAGCGCTCAAGGTCAACGTGCATCGGGCGGTAAAGAGCCTGCGGAAGATCCTGGGCGATCGGAGCGAGCCATGA
PROTEIN sequence
Length: 211
MTERNGRPPLLRLVGSDGDAAPAVPEPTARDTDWAILMAHAQDGDRSAYQRLLQEITPYLRSLAARRHRDPSDIEDAVQDILLTVHAIRHTFDPTRPFGPWLVTIANRRFIDRLRRQGRRRNRETPLTPEHETFAEPQANLEETPDRRELEKAIDELSPMQRKAIQLLKLKEMSLREASTASGMSIAALKVNVHRAVKSLRKILGDRSEP*