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SCNpilot_cont_300_bf_scaffold_516_curated

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Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_516_curated_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105..335)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SV79_CAUSK
Uncharacterized protein {ECO:0000313|EMBL:KIZ47578.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_516_curated_2
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1778..2173
DNA (396bp) protein (132aa)
Vitamin K epoxide reductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V461_9BRAD
Vitamin K epoxide reductase {ECO:0000313|EMBL:EFI52741.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_cont_300_bf_scaffold_516_curated_3
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2191..3732
DNA (1542bp) protein (514aa)
Radical SAM domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V462_9BRAD
Radical SAM domain protein {ECO:0000313|EMBL:EFI52742.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
putative Fe-S oxidoreductase; K06937
SCNpilot_cont_300_bf_scaffold_516_curated_4
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3729..4565
DNA (837bp) protein (279aa)
Methyltransferase type 11 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V463_9BRAD
Methyltransferase type 11 {ECO:0000313|EMBL:EFI52743.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
ubiquinone/menaquinone biosynthesis methylase
SCNpilot_cont_300_bf_scaffold_516_curated_5
Arthrospira platensis, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4549..4833)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI00036D2F77
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAI94071.1}; TaxID=696747 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira platensis (strain NIES-39 / IAM M-135) (Spirulina; platensis).;"
SCNpilot_cont_300_bf_scaffold_516_curated_6
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5495..6163)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V465_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52745.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_516_curated_7
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6160..6792)
DNA (633bp) protein (211aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Afipia sp. 1NLS2 RepID=D6V466_9BRAD
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFI52746.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
FecI-like sigma-24 factor
SCNpilot_cont_300_bf_scaffold_516_curated_8
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6789..7298)
DNA (510bp) protein (170aa)
DoxX family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V467_9BRAD
DoxX family protein {ECO:0000313|EMBL:EFI52747.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
DoxX
SCNpilot_cont_300_bf_scaffold_516_curated_9
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7295..8083)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V468_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52748.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_516_curated_10
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8067..8951)
DNA (885bp) protein (295aa)
UPF0276 protein AfiDRAFT_0736 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V469_9BRAD
UPF0276 protein AfiDRAFT_0736 {ECO:0000256|HAMAP-Rule:MF_00697}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein; K09930 hypothetical protein
SCNpilot_cont_300_bf_scaffold_516_curated_11
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9002..9343)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V470_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52750.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_516_curated_12
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9473..10276)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SD99_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD92176.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_516_curated_13
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10325..10522)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SDA0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD92177.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
SCNpilot_cont_300_bf_scaffold_516_curated_14
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10562..11281)
DNA (720bp) protein (240aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Afipia sp. 1NLS2 RepID=D6V471_9BRAD
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:EFI52751.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
cytochrome c biogenesis protein, transmembrane region
SCNpilot_cont_300_bf_scaffold_516_curated_15
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11283..11663)
DNA (381bp) protein (127aa)
Thioredoxin domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V472_9BRAD
Thioredoxin domain protein {ECO:0000313|EMBL:EFI52752.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
thioredoxin (H-type,TRX-H)
SCNpilot_cont_300_bf_scaffold_516_curated_16
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11821..12381
DNA (561bp) protein (187aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Afipia sp. 1NLS2 RepID=D6V473_9BRAD
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:EFI52753.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
peroxiredoxin
SCNpilot_cont_300_bf_scaffold_516_curated_17
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12395..13027)
DNA (633bp) protein (211aa)
Redoxin domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V474_9BRAD
Redoxin domain protein {ECO:0000313|EMBL:EFI52754.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
thiol--disulfide interchange redox-active center transmembrane protein
SCNpilot_cont_300_bf_scaffold_516_curated_18
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13024..13353)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V475_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52755.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_516_curated_19
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15331..15546
DNA (216bp) protein (72aa)
Copper chaperone n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSX2_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig140, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53550.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
heavy metal transport/detoxification protein
SCNpilot_cont_300_bf_scaffold_516_curated_20
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15576..18029
DNA (2454bp) protein (818aa)
Heavy metal translocating P-type ATPase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFJ0_NITHX
Bradyrhizobium elkanii strain UASWS1015 Contig140, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53549.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
heavy metal translocating P-type ATPase
SCNpilot_cont_300_bf_scaffold_516_curated_21
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18042..19301
DNA (1260bp) protein (420aa)
MFS transporter n=2 Tax=Oligotropha carboxidovorans RepID=F8BR07_OLICM
MFS transporter
MFS transporter {ECO:0000313|EMBL:AEI08251.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_300_bf_scaffold_516_curated_22
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19388..19819
DNA (432bp) protein (144aa)
Transcriptional regulator, MerR family n=2 Tax=Oligotropha carboxidovorans RepID=B6JKB5_OLICO
Copper export regulator {ECO:0000313|EMBL:CEG10188.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
MerR family transcriptional regulator; K13638 MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
SCNpilot_cont_300_bf_scaffold_516_curated_23
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20071..20766
DNA (696bp) protein (232aa)
Cytochrome c biogenesis protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSW7_9BRAD
Thiol:disulfide interchange protein DsbD {ECO:0000313|EMBL:CEG10186.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
cytochrome c biogenesis protein, transmembrane region
SCNpilot_cont_300_bf_scaffold_516_curated_24
Pseudomonas sp. K-62, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21298..21705)
DNA (408bp) protein (136aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=76885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. K-62.;"
phosphoribosyl-AMP cyclohydrolase; K01496 phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Pseudomonas sp. K-62 RepID=I2FFZ0_9PSED
SCNpilot_cont_300_bf_scaffold_516_curated_25
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22472..23818)
DNA (1347bp) protein (449aa)
pyridine nucleotide-disulfide oxidoreductase dimerisation region; K00383 glutathione reductase (NADPH) [EC:1.8.1.7]
Pyridine nucleotide-disulphide oxidoreductase dimerisation region n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJE8_XANP2
Pyridine nucleotide-disulphide oxidoreductase dimerisation region {ECO:0000313|EMBL:ABS68141.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_300_bf_scaffold_516_curated_26
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23919..24362)
DNA (444bp) protein (148aa)
Transcriptional regulator n=3 Tax=Proteobacteria RepID=G2I8R4_GLUXN
MerR family transcriptional regulator {ECO:0000313|EMBL:ETR77832.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_516_curated_27
Rhizobium sp. NT-26, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24439..24831
DNA (393bp) protein (131aa)
Mercuric transport protein (Mercury ion transport protein) n=1 Tax=Rhizobium sp. RepID=L0NMQ0_RHISP
Mercuric transport protein (Mercury ion transport protein) {ECO:0000313|EMBL:CCF22086.1}; TaxID=1125847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. NT-26.;"
merT; mercuric transport protein MerT; K08363 mercuric ion transport protein
SCNpilot_cont_300_bf_scaffold_516_curated_28
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24861..25160
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IEU2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF82175.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
putative mercuric transport protein, periplasmic
SCNpilot_cont_300_bf_scaffold_516_curated_29
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25165..25425
DNA (261bp) protein (87aa)
Mercuric transport protein n=1 Tax=Pseudomonas sp. K-62 RepID=I2FFZ3_9PSED
Membrane transport protein MerF {ECO:0000313|EMBL:KGB53366.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_516_curated_30
Rhizobium sp. NT-26, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25422..26855
DNA (1434bp) protein (478aa)
Mercuric reductase (Hg(II) reductase) MerA2 {ECO:0000313|EMBL:CCF22190.1}; EC=1.16.1.1 {ECO:0000313|EMBL:CCF22190.1};; TaxID=1125847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. NT-26.;"
merA; mercuric reductase (MerA); K00520 mercuric reductase [EC:1.16.1.1]
mercuric reductase n=1 Tax=Afipia birgiae RepID=UPI00030A2D0B
Displaying items 1-30 of 46 in total

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