ggKbase home page

SCNpilot_cont_300_bf_scaffold_516_curated_14

Organism: scnpilot_dereplicated_Rhizobiales_3

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38
Location: comp(10562..11281)

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Afipia sp. 1NLS2 RepID=D6V471_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 239.0
  • Bit_score: 436
  • Evalue 1.30e-119
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:EFI52751.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 239.0
  • Bit_score: 436
  • Evalue 1.80e-119
cytochrome c biogenesis protein, transmembrane region similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 249.0
  • Bit_score: 223
  • Evalue 9.10e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
GTGTCCGCGAATCTCGCGCTGGGCTACGCCGCCGGCGCCCTATCGACGCTCTCGCCGTGCGTGCTCCCGATCCTACCGATCGTGCTGTTCGGTGCGCTCGAGCGGCATCTCTGGGGACCGGTCGCGCTCGCTGCGGGACTGGCGGCGTCCTTCGCCGGCGTCGGCATCACGCTGGCATCGGTGGGTTTCAGCGTCGGCATAGACCCTGAAACGTTGCGGCTTGCCGTGGCCGCGCTGATGGGCGCCGCTGGGGTGATCCTTCTTGTGCCGGCGCTTCAGGGCGGGGTGGCCGCGATGGTGTCTCCCGTAGCCGGCAAAGGCCAGATCCTGCTCGACCGCCTTCAGCCGACCGGTATCTGGGGCCAGTTCGCGCTCGGAGCCGCGCTTGGCGTGATCTGGTCGCCATGTTCGGGGCCGACGCTCGGCGCGGCTATCGGTCTTGCGGCCCAGGGCGACGATCTCGGCAGGGCAGCAGCGACGATGTCCGCCTTCGCGCTCGGAGCGGCGACGCCCATTCTTCTGCTCGCCTACGGTTCGCGGCAGGCGATCATGGCACGGCGGGATTGGATGGCGCGAGCGTCGCGCATCGGAAAACCTCTGATGGGTGCCGCCTTCTTCGGCATCGGACTCTTCGTACTCACCGGTCTCGACAAGATCGTCGAGACCTCGCTGACGAACGCCATGCCGGAATGGCTGGCGAACGTGACGACGCGTCTGTGA
PROTEIN sequence
Length: 240
VSANLALGYAAGALSTLSPCVLPILPIVLFGALERHLWGPVALAAGLAASFAGVGITLASVGFSVGIDPETLRLAVAALMGAAGVILLVPALQGGVAAMVSPVAGKGQILLDRLQPTGIWGQFALGAALGVIWSPCSGPTLGAAIGLAAQGDDLGRAAATMSAFALGAATPILLLAYGSRQAIMARRDWMARASRIGKPLMGAAFFGIGLFVLTGLDKIVETSLTNAMPEWLANVTTRL*