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SCNpilot_cont_300_bf_scaffold_73_curated_17

Organism: scnpilot_dereplicated_Rhizobiales_3

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38
Location: comp(15098..15997)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21B87_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 295.0
  • Bit_score: 402
  • Evalue 4.30e-109
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 295.0
  • Bit_score: 402
  • Evalue 1.40e-109
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABD86349.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 295.0
  • Bit_score: 402
  • Evalue 6.10e-109

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGCGTTTCGATCTGGTCGATCTGCAGTTGTTCGTCGCCGTGGCGGAGGCGCGCAGCATTACCCATGGGGCGCCGCGCGTGCACCTCGCCGTCGCTTCCGCCAGCGAACGCCTCAAGACTCTCGAACAGGCGCTCGACGTCACGCTGCTGGTGCGCGGCCGCCACGGCGTCTCGCTGACGGAGGCGGGCGAAAGCCTGCTCGATCATGCCCGGGTCGTGCTGGCCGATGTCGAGGCGCTGCGGGGGGATCTCGCCGCCTATGCTGGCGGCCTCAAGAGCAGCATTCATCTGCTGGCGAACACGTCGGGCCTGTCGGAACATCTGCCACGCGCACTAGCGAGTTTTCTGCGCGAACATCCCCAGGTGAATGTCGATATCGAGGAGCGGGAAAGCATCGGCATCGCCGAGGCCATCGCGGCGGGCAGCGCCGATATCGGCATTGCCGTCGACGCGGCATTGCCCAAGGGAATTGAGCGCTTTGCCTTTCGCGACGACCCGCTGGTGCTGGTGGTGCCGGCTCAAGATGCGCTGGCGCATCGTCGCGCCATCGACTTCCGCGACGTGCTCGCGCGCGATTTCATTGGGCTGGCGATCAATACCGCATTGCAGACCCATCTCGCGACACAGACCGCGCGGTTCGGCGCGCGGTTGCGCTTTCGTGCGCGGCTGAAGGACTTCGATGCCATCTGCCAGATGGTGGCCGCCGATGTCGGTGTCGCGGTGGTGCCGGAAGCCGCCGCGCGGCGCTGCAGCCGCAGCATGGCGATCAAGCGCGTGCGTATCCGCGATGCCTGGGCGGCGCGGCGGCTGGTGATCTGCGTGCGCAGCCTGCAGGCGCTGCCGCGCCCGGCGCAGCAACTGGTGGCGCATCTGCGCAGTGCCGCGCCCGCCAAGGCGTAG
PROTEIN sequence
Length: 300
MRFDLVDLQLFVAVAEARSITHGAPRVHLAVASASERLKTLEQALDVTLLVRGRHGVSLTEAGESLLDHARVVLADVEALRGDLAAYAGGLKSSIHLLANTSGLSEHLPRALASFLREHPQVNVDIEERESIGIAEAIAAGSADIGIAVDAALPKGIERFAFRDDPLVLVVPAQDALAHRRAIDFRDVLARDFIGLAINTALQTHLATQTARFGARLRFRARLKDFDAICQMVAADVGVAVVPEAAARRCSRSMAIKRVRIRDAWAARRLVICVRSLQALPRPAQQLVAHLRSAAPAKA*