ggKbase home page

SCNpilot_cont_300_bf_scaffold_6_curated_5

Organism: scnpilot_dereplicated_Rhizobiales_3

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38
Location: comp(6757..7983)

Top 3 Functional Annotations

Value Algorithm Source
pyridoxal-dependent decarboxylase exosortase system type 1 protein; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 408.0
  • Bit_score: 570
  • Evalue 4.00e-160
diaminopimelate decarboxylase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3A624 similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 408.0
  • Bit_score: 659
  • Evalue 2.10e-186
Pyridoxal-dependent decarboxylase exosortase system type 1 protein {ECO:0000313|EMBL:EJZ06970.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 25954.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 402.0
  • Bit_score: 592
  • Evalue 5.70e-166

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mycobacterium vaccae → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1227
GTGACCGCCAAAGACACTATCGCAGCATTCGATGTCATCGACGGCAAACTGGCTGTCGGCGGTATCCCGGTTGATCGTCTGGCTGCACGGGTCGGCAGCACGCCGTTCTTTGCCTATGATCGCCGCCTGCTGACTCAACGCATCGCGTTGCTCCGCCAGAAGCTGCCGCCGAAAATCAACCTTAGCTACGCCATCAAGGCAAATCCGATGCCTGCTGTCGTGCAGCATTTGAGCTCACTGGTCGATTCCTTCGATGTGGCATCAACCGGCGAAATGCGGATTGCGCTGGATACGCCAATTGCTGCCGATCACGTCAGCTTTGCTGGTCCAGCCAAGACGATTGCCGAACTTACGCAAGCTGTCGCGGCGGGCATAACGGTTGAACTCGAATCGGAAACGGAAGCACGCCGCGTTATTGCGATCGGCGAGCAACTCGGCGTACGCCCCCGTGTGGCGATCCGGGTGAACCCCGACTTTGCCATCAAGGGTTCGGGCATGCGGATGGGAGGCGGACCGCAGCAATTCGGCGTCGATTCCGAGATCGTGCCTCAACTGCTTGCCGCGCTTGCCAAGGCCGATCTTGACGTCCTTGGGTTTCATGTCTTCGGCGGCTCGCAGAATCTTCGTGCCGAGATCCTTTGCGAGGCACAGCGCAAAACGGTCGAATTGGTGACGACGTTAGCAGCTGCGATGCCGACGCCGATACGTTACCTCAATCTCGGTGGCGGATTTGGCATCCCCTATTTCGACAAGGACGAATCGCTTGACCTGGACATGGTTGGCGCCAATCTTCATGAGCTTGTCGACGGCCCTATCCGCAATAACTTTCCCGAGGCGCGCCTGGTCATCGAACTTGGCCGTTACATTGTCGGCGAATGCGGTGTTTACGTCACCCGGGTCGTCGACTGCAAACAATCGCGCGGCAAGCAGTTCGTGATGGTCGATGGCGGCTTACATCACCAACTTGCGGCATCCGGCAATTTCGGCCAGGTCATTCGTCGCAACTACCCGCTGGCGATCGGCAATCGGATGAACGAAGCTGCGACCGGAGCGGCCAACGTTGTTGGATGCCTGTGCACGCCGCTGGATCTGCTTGGCGACAGCGTTGCTGTGCCAAAAGTTGAGATCGATGACCTGGTCGTATTGTTCCAGGCAGGCGCTTATGGCATGACCGCGAGCCCAAGCGCGTTTCTTGGCCACCCGCCAGCTGTCGAAATTCTGGTCTAG
PROTEIN sequence
Length: 409
VTAKDTIAAFDVIDGKLAVGGIPVDRLAARVGSTPFFAYDRRLLTQRIALLRQKLPPKINLSYAIKANPMPAVVQHLSSLVDSFDVASTGEMRIALDTPIAADHVSFAGPAKTIAELTQAVAAGITVELESETEARRVIAIGEQLGVRPRVAIRVNPDFAIKGSGMRMGGGPQQFGVDSEIVPQLLAALAKADLDVLGFHVFGGSQNLRAEILCEAQRKTVELVTTLAAAMPTPIRYLNLGGGFGIPYFDKDESLDLDMVGANLHELVDGPIRNNFPEARLVIELGRYIVGECGVYVTRVVDCKQSRGKQFVMVDGGLHHQLAASGNFGQVIRRNYPLAIGNRMNEAATGAANVVGCLCTPLDLLGDSVAVPKVEIDDLVVLFQAGAYGMTASPSAFLGHPPAVEILV*