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SCNpilot_cont_300_bf_scaffold_6_curated_82

Organism: scnpilot_dereplicated_Rhizobiales_3

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38
Location: 107650..108831

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07IU4_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 393.0
  • Bit_score: 698
  • Evalue 5.00e-198
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 393.0
  • Bit_score: 698
  • Evalue 1.60e-198
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ABJ08140.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 393.0
  • Bit_score: 698
  • Evalue 7.10e-198

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1182
ATGTCCATTCGCACCAAGACATTGTTGCAGGTTGCCGCCGGTGCCGCGCTTGCCGGAACGTTCGCGTTCACTGCGGCGCAGGCACAGGAAACCGTTAAGATCGGCCTGATCGTGCCGATGACCGGCGGTCAGGCATCGACCGGAAAGCAGATCGACAACGCCGTCAAGCTTTATATGCAGCAGCACGGCGACACCGTCGCCGGCAAGAAGATCGAAGTCATCCTCAAGGACGACGCCGCGGTGCCGGATAACACCAAGCGGCTGGCGCAGGAACTGATCGTCAACGACAAGGTCAACATCATCGCCGGCTTCGGCGTGACGCCTGCGGCCTTTGCCGCTGCGCCGCTGGCTACGCAGGCGAAGGTGCCGGAAGTCGTCATGGCGGCGGGTACGTCGGTCATCACCGAGCGTTCGCCCTATATCGTGCGCACCAGCTTCACGCTGGCGCAGTCGTCGACCATCATCGGCGATTGGGCGGTGAAGAACGGTATCAAGAAGGTGGCGACGCTGACCTCGGACTATGCGCCGGGCAATGACGCGCTGCAGTTCTTCAAGGAGCATTTCACCGCTGGCGGCGGCCAAATCGTCGAAGAGGTCAAGGTGCCTCTCTCCAATCCGGACTTCGCGCCGTTCCTGCAGCGCATGAAGGACGCCAAGCCGGACGCCATGTTCGTGTTCGTACCGGCCGGGCAGGGCGGCAACTTCATGAAGCAGTATGCCGAGCGCGGTCTCGACAAGAGCGGCATCAAGGTCATCGGACCGGGCGACGTGATGGACGACGACCTGCTCAACGGCATGGGCGACTCGGCGCTCGGCGCGGTGACGGCGCACATGTATTCGGCGGCGCATCCATCGCAGCTGAACAAGGATTTCGTCGCGGCCTACAAGAAGGCTTACAACCAGCGGCCGGGCTTCATGGCGGTCGGCGGTTATGACGGTATCCATCTCGTCTACGAAGCGCTGAAGAAGACCGGCGGCAAGGCCGATGGCGACTCGCTGATCGCAGCGATGAAGGGCATGAAGTGGGAAAGTCCGCGCGGCCCGATCTCGATCGATCCCGAGACCCGCGACATCGTGCAGAACATCTACGTCCGCAAGGTCGAGAAGAAGGACGGCGAGCTCTACAACATCGAGTTCGCAACCTTCGAGGCCGTCAAGGACCCCGGCAAGACCAAGAAGTGA
PROTEIN sequence
Length: 394
MSIRTKTLLQVAAGAALAGTFAFTAAQAQETVKIGLIVPMTGGQASTGKQIDNAVKLYMQQHGDTVAGKKIEVILKDDAAVPDNTKRLAQELIVNDKVNIIAGFGVTPAAFAAAPLATQAKVPEVVMAAGTSVITERSPYIVRTSFTLAQSSTIIGDWAVKNGIKKVATLTSDYAPGNDALQFFKEHFTAGGGQIVEEVKVPLSNPDFAPFLQRMKDAKPDAMFVFVPAGQGGNFMKQYAERGLDKSGIKVIGPGDVMDDDLLNGMGDSALGAVTAHMYSAAHPSQLNKDFVAAYKKAYNQRPGFMAVGGYDGIHLVYEALKKTGGKADGDSLIAAMKGMKWESPRGPISIDPETRDIVQNIYVRKVEKKDGELYNIEFATFEAVKDPGKTKK*