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SCNpilot_cont_300_bf_scaffold_6_curated_90

Organism: scnpilot_dereplicated_Rhizobiales_3

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38
Location: 116041..116916

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003710FF7 similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 290.0
  • Bit_score: 360
  • Evalue 1.40e-96
RNA polymerase sigma 70 {ECO:0000313|EMBL:KJC47145.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 290.0
  • Bit_score: 364
  • Evalue 1.80e-97
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 297.0
  • Bit_score: 337
  • Evalue 5.30e-90

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Taxonomy

Bradyrhizobium sp. LTSP885 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGGACGAGAAAAACTTTCTGGCGCAGCAATTCGAGGCCCAGCGGGGCCGGCTGCGTGGCGTCGCCTACCGCATGCTGGGTTCGCTGAGCGAGGCCGACGATGCGGTGCAGGAGGCATGGCTGCGGCTGGGCCGCAACGATGCCGCCGCCATCGATAATCTCGGCGGCTGGCTGACCACGGTGGTGGCGCGCATCTGTCTCGACATGCTGCGCTCACGCAAGGCGCGGCGCGAGGATGGACTCGACAGCGCCGGCCCCGAGCCGGTGGCCAACGACAACATCGAGGCGGTGCTCGAACAGGAGGCGCAACTCGCCGAGTCGGTCGGCCTCGCGCTGCTGGTGGTGTTGCAGACGCTGGCGCCGGCCGAGCGCATCGCCTTCGTGTTGCATGACATGTTCGATCTGCCGTTCGACGATATCGCGCCGATTGTCGGCCGTTCGCCGACGGCGGCCCGACAACTGGCCAGCCGCGCGCGGCGGCGGGTGCAGGGCAAGGCTGTGCGGCCCGATGCCGACATCGCCGGCCAGCGGGGTGTCGTTGACGCTTTTCTTGCTGCGGCGCGTGGCGGCGATATGGAGGGTCTGCTTGCGGCGCTCGACCCGGATGTCGTGGTGCGCGCCGACGCGGTGGCGAGACAGGCGGGCGCGAAGGAGGAAGTCCACGGTGCGCAGCGCGTGGCGCAGTTCTATCTCGGCAAGGCGCAGCAAGCGCGTCCGGCGCTGGTCGATGGTCGCGTTGGCATCGTCGTGGCGCCGCGCGGGCGGTTGGCGCTGGTGCTGAAGCTGAGCTTCGCGAACGAGCGCATTACGGGCATCGACCTCATCGCCGATCCCGCACAGCTGCAGCGGTTCGACCTTGCGACGCTCGAGAGCTGA
PROTEIN sequence
Length: 292
MDEKNFLAQQFEAQRGRLRGVAYRMLGSLSEADDAVQEAWLRLGRNDAAAIDNLGGWLTTVVARICLDMLRSRKARREDGLDSAGPEPVANDNIEAVLEQEAQLAESVGLALLVVLQTLAPAERIAFVLHDMFDLPFDDIAPIVGRSPTAARQLASRARRRVQGKAVRPDADIAGQRGVVDAFLAAARGGDMEGLLAALDPDVVVRADAVARQAGAKEEVHGAQRVAQFYLGKAQQARPALVDGRVGIVVAPRGRLALVLKLSFANERITGIDLIADPAQLQRFDLATLES*