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SCNpilot_cont_300_bf_scaffold_192_curated_36

Organism: scnpilot_dereplicated_Rhizobiales_3

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38
Location: comp(39152..40234)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor id=2920419 bin=GWC2_Chloroflexi_49_37 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 35.0
  • Coverage: 337.0
  • Bit_score: 183
  • Evalue 5.00e-43
ABC branched chain amino acid family transporter, periplasmic ligand binding protein similarity KEGG
DB: KEGG
  • Identity: 32.0
  • Coverage: 362.0
  • Bit_score: 170
  • Evalue 1.40e-39
Tax=GWC2_Chloroflexi_49_37_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 35.0
  • Coverage: 337.0
  • Bit_score: 183
  • Evalue 7.00e-43

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Taxonomy

GWC2_Chloroflexi_49_37_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1083
ATGGCGTCTCAGGCTCACGCCCAAGCCAAGCCGAAGATCACCATCGGAGCTGTCTTGCCGCTGACGGGTGTGCTGGCGCCCTACGGCAAGCCGAATCTCGAAGCCATCACGTTGGCGATCGACGAGGTGAACAAGGCTGGCGGTATCGACGGTCGCGAACTCGAGCTCGTTGTCGAAGATACGCAGGCGTCCAACACCACGGCCATCAATGCGCTGAACAAAGTGCTGCAATCGAAACCAGTCGCGGTGATCGGGCCAGGACTCGGCACGCAAATCCTTGCGCTTCAGCCCCTGACGGAGAAGGCGAAGGTCACGCTGATCGGTGGAGCCACCACGCCGGGCGTCACACAGCAGGGCGCCAAGTACTATTTCCGCAACAGCAGCAACGATGCGTTCGACAAGAAGTTCGTCGCCAAATTCATCATCGATGACCTGAAGAAGACCAAGGTTGGTATCATTCACGTGATGGCCGAGTGGGGCTATCAGGGGCGGGATTATCTCTCCAAGGACCTCAAGGAAATCGGCAATCTCACCCCGGTGGCCGTGGCGTCCTATCAGCCGACCGACAAGGACATGACGGCGCAAGTCACTGCGATGACCTCGGCGGGAGCCGACGCTGTCTTCGTGCAGGGCTATCCCATTGACGAGTCACTGACGCTTAAGAAGTTCAATCAGCTCGGCAGTAACGCCACCTATCTGGCCTCGGCGAGCACCTGCAAAGCGTTCCTGCGTGACCTTGTGACGGCGAGCGAATTGGTGGGCAAATATTGTCAGGCGCCTGACATTCTGCCGACGCTGAACGAGCGTCCTGGCGTCAAGAAGTTCGTCGCTGACTACAAGCAGAAGACCGGCTTCCCGCCCGATATGTACATCGCGCAGGACTACGACGCAGTGAAAATGCTGGTCGAGATCATGAAGGAAAAGGGTGTCGATCGTGACGCCATCCGCGATGGCTTCAAGAGCAAGTCTTACGAGGGCATCCTCGGTAATTACAAGGCCGATGCGGAAGGCACGCTGTGGCACAACCGGGTGATGATGCGCTTCGACGCTGACGGTAAGGTGACCGTCGTCGCGCGTCAGTAG
PROTEIN sequence
Length: 361
MASQAHAQAKPKITIGAVLPLTGVLAPYGKPNLEAITLAIDEVNKAGGIDGRELELVVEDTQASNTTAINALNKVLQSKPVAVIGPGLGTQILALQPLTEKAKVTLIGGATTPGVTQQGAKYYFRNSSNDAFDKKFVAKFIIDDLKKTKVGIIHVMAEWGYQGRDYLSKDLKEIGNLTPVAVASYQPTDKDMTAQVTAMTSAGADAVFVQGYPIDESLTLKKFNQLGSNATYLASASTCKAFLRDLVTASELVGKYCQAPDILPTLNERPGVKKFVADYKQKTGFPPDMYIAQDYDAVKMLVEIMKEKGVDRDAIRDGFKSKSYEGILGNYKADAEGTLWHNRVMMRFDADGKVTVVARQ*