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SCNpilot_cont_300_bf_scaffold_28_curated_25

Organism: scnpilot_dereplicated_Rhizobiales_3

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38
Location: comp(27326..28054)

Top 3 Functional Annotations

Value Algorithm Source
High-affinity branched-chain amino acid transport ATP-binding protein BraF n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BWR2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 242.0
  • Bit_score: 346
  • Evalue 3.00e-92
ABC-type branched-chain amino acid transport system ATPase component {ECO:0000313|EMBL:EYR83619.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 242.0
  • Bit_score: 346
  • Evalue 4.20e-92
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 239.0
  • Bit_score: 345
  • Evalue 1.20e-92

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGACGACGCTGCTCGATATATCCGCTCTGACGCGGCGGTTCGGTGGTCTCGTTGCCGTCAATGGTGTTTCGTTTGAGGTCGCGCGCGGTGAGGTCGTCGGGCTACTGGGGCCGAACGGGTCGGGCAAGACTACGGTACTCAACATGATTTCCGGTAGCCTCAAGCCGAGCGGTGGCGATATCCGGCTCAACGGCGAGAAGTTGTCGGGCCTGCCGGCGCATCGCATCGCCCGCAAAGGCGTCGCGCGCACCTTCCAGCTCGTGCGTATCCTGCCGTCGCTGAGCGTGGCGGAGAACATCGTCGCCGCGCTGGCGTTTCGAAGCGCGCCGCTATGGGGCGCCGAGGTTCATGCGGCTGCCGATGATCTGCTTGTGATTGTCGGACTCGGCGGACGTGGCAACGAACGCGCGGAGAACCTCACCTACATCGATCAGAAGCGGATGGAACTGGCGCGCGCGCTGGCCGCGGCTCCGCAATTGCTGCTGCTCGACGAATGGCTGGCGGGACTCAATCCAACCGAATTGCGCGTCGGCATCGAACTGATCGCTTCGTTGCGCGATTCCGGCATCACTATCGTGCTGGTCGAGCACGTCATGGAGGCCGTGCGGGCGTTATGCGGGCGCTGCATCGTGATGACGGCCGGCAGCAAGATCGCGGACGGGCCGACCGCCGACGTTTTGCGCGATCCCGAGGTCATTCGTGCCTATCTCGGAGCCAGCCATGCTTGA
PROTEIN sequence
Length: 243
MTTLLDISALTRRFGGLVAVNGVSFEVARGEVVGLLGPNGSGKTTVLNMISGSLKPSGGDIRLNGEKLSGLPAHRIARKGVARTFQLVRILPSLSVAENIVAALAFRSAPLWGAEVHAAADDLLVIVGLGGRGNERAENLTYIDQKRMELARALAAAPQLLLLDEWLAGLNPTELRVGIELIASLRDSGITIVLVEHVMEAVRALCGRCIVMTAGSKIADGPTADVLRDPEVIRAYLGASHA*