name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_300_bf_scaffold_28_curated_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(152..649)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NYD4_9BRAD
Membrane protein {ECO:0000313|EMBL:KIZ47415.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_2
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(652..1506)
|
Beta-propeller domains-containing protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QI29_9BRAD
Beta-propeller domains-containing protein {ECO:0000313|EMBL:EGP09232.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein; K06872 uncharacterized protein
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_3
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1535..2143)
|
LemA family protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037D2FE6
Lipoprotein {ECO:0000313|EMBL:EJZ29293.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
lipoprotein; K03744 LemA protein
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_4
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2317..4644)
|
carbon-monoxide dehydrogenase; K03520 carbon-monoxide dehydrogenase large subunit [EC:1.2.99.2]
Carbon-monoxide dehydrogenase large subunit n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HA47_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig173, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49508.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_5
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4709..5521)
|
dihydrodipicolinate synthetase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
Dihydrodipicolinate synthase/N-acetylneuraminate lyase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YN80_9BRAD
Dihydrodipicolinate synthase/N-acetylneuraminate lyase {ECO:0000313|EMBL:EHR05682.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_6
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5681..6535)
|
Transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z0R6_9RHIZ
LysR family transcriptional regulator HdfR {ECO:0000313|EMBL:BAQ16592.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
HTH-type transcriptional regulator
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_7
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6608..7774)
|
Cystathionine gamma-synthase {ECO:0000313|EMBL:BAQ16597.1}; EC=2.5.1.48 {ECO:0000313|EMBL:BAQ16597.1};; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
Cystathionine gamma-synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQC6_NITHX
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7909..9639)
|
sulfite reductase subunit beta; K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
Sulfite reductase [NADPH] hemoprotein beta-component {ECO:0000255|HAMAP-Rule:MF_01540}; Short=SiR-HP {ECO:0000255|HAMAP-Rule:MF_01540};; Short=SiRHP {ECO:0000255|HAMAP-Rule:MF_01540};; EC=1.8.1.2 {ECO:0000255|HAMAP-Rule:MF_01540};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Sulfite reductase [NADPH] hemoprotein beta-component n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=CYSI_NITHX
rbh
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_9
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9651..11501)
|
Sulfite reductase [NADPH] flavoprotein alpha-component {ECO:0000256|PIRNR:PIRNR000207, ECO:0000256|SAAS:SAAS00014038}; Short=SiR-FP {ECO:0000256|PIRNR:PIRNR000207};; EC=1.8.1.2 {ECO:0000256|PIRNR:PIRNR000207, ECO:0000256|SAAS:SAAS00013953};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
sulfite reductase (NADPH) flavoprotein, alpha chain; K00380 sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
Sulfite reductase [NADPH] flavoprotein alpha-component n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQC8_NITHX
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_10
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11907..12932)
|
Acetylpolyamine aminohydrolase (Histone deacetylase family) n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TP12_9BRAD
Acetylpolyamine aminohydrolase {ECO:0000313|EMBL:KJC61571.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
histone deacetylase superfamily protein
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_11
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13194..14504
|
Putative transporter protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GCK0_9BRAD
Sugar phosphate permease {ECO:0000313|EMBL:KJC46848.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
putative transporter protein
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_12
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14691..15647
|
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI00037539B7
Bradyrhizobium elkanii strain UASWS1015 Contig179, whole genome shotgun sequence {ECO:0000313|EMBL:KIU47762.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
beta-lactamase domain-containing protein
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_13
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15647..16222
|
Rhodanese n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EMG3_METSB
Bradyrhizobium elkanii strain UASWS1015 Contig179, whole genome shotgun sequence {ECO:0000313|EMBL:KIU47763.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
rhodanese
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_14
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16302..17090
|
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI00035D08C6
Sulphur oxidation protein SoxZ {ECO:0000313|EMBL:CDX36481.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
sulfur oxidation protein SoxZ
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17242..17937)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6S1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36449.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
putative high-affinity branched-chain amino acid transport ATP-binding protein LivF
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_16
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17937..18686)
|
ABC transporter related n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TI20_9BRAD
ABC transporter related {ECO:0000313|EMBL:CCE06108.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_17
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18683..19984)
|
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D9Y6_BRAJP
ABC transporter permease {ECO:0000313|EMBL:KJC36365.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein; K01998 branched-chain amino acid transport system permease protein
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_18
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19981..20928)
|
Inner-membrane translocator n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TI18_9BRAD
Inner-membrane translocator {ECO:0000313|EMBL:CCE06106.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein; K01997 branched-chain amino acid transport system permease protein
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_19
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21068..22303)
|
Extracellular ligand-binding receptor n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TI17_9BRAD
Extracellular ligand-binding receptor {ECO:0000313|EMBL:CCE06105.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein; K01999 branched-chain amino acid transport system substrate-binding protein
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_20
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22638..23519)
|
Transcriptional regulator, AraC family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FF3_MESSB
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABG63872.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_21
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23688..24221
|
2,4'-dihydroxyacetophenone dioxygenase n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWW5_POLGS
2,4'-dihydroxyacetophenone dioxygenase
2,4'-dihydroxyacetophenone dioxygenase {ECO:0000313|EMBL:ADZ71542.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_22
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24376..25134)
|
Short-chain dehydrogenase/reductase SDR n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FE8_MESSB
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABG63877.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_23
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25147..26598)
|
Vanillin dehydrogenase {ECO:0000313|EMBL:ABG63878.1}; EC=1.2.1.67 {ECO:0000313|EMBL:ABG63878.1};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Vanillin dehydrogenase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FE7_MESSB
aldehyde dehydrogenase
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_24
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26614..27333)
|
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FE6_MESSB
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family {ECO:0000313|EMBL:ABG63879.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_25
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27326..28054)
|
High-affinity branched-chain amino acid transport ATP-binding protein BraF n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BWR2_9RHIZ
ABC-type branched-chain amino acid transport system ATPase component {ECO:0000313|EMBL:EYR83619.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_26
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28051..28998)
|
Branched-chain amino acid transport system permease protein LivM n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCC0_PELHB
branched-chain amino acid transport system permease protein LivM; K01998 branched-chain amino acid transport system permease protein
Branched-chain amino acid transport system permease protein LivM {ECO:0000313|EMBL:AEQ53714.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_27
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28995..29867)
|
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FE3_MESSB
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:ABG63882.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_28
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29889..31115)
|
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FE2_MESSB
twin-arginine translocation pathway signal; K01999 branched-chain amino acid transport system substrate-binding protein
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:ABG63883.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_29
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31371..32885)
|
Methyltransferase n=1 Tax=Pseudomonas stutzeri NF13 RepID=M2UJI4_PSEST
Methyltransferase {ECO:0000313|EMBL:EMD98654.1}; TaxID=1212548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri NF13.;"
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_30
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32908..33735)
|
phnC; ABC transporter, phosphonate transport protein PhnC (EC:3.6.3.28); K02041 phosphonate transport system ATP-binding protein [EC:3.6.3.28]
ABC transporter, phosphonate transport protein PhnC {ECO:0000313|EMBL:AEI05393.1}; EC=3.6.3.28 {ECO:0000313|EMBL:AEI05393.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
ABC transporter, phosphonate transport protein PhnC n=2 Tax=Oligotropha carboxidovorans RepID=B6JJH2_OLICO
|