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SCNpilot_cont_300_bf_scaffold_28_curated

Search features with annotation key words

Displaying items 61-90 of 366 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_28_curated_61
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63131..63526)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FBC5CB
Endoribonuclease L-PSP {ECO:0000313|EMBL:KGE02449.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_28_curated_62
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63561..64067)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D679_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL07347.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_cont_300_bf_scaffold_28_curated_63
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64228..65247
DNA (1020bp) protein (340aa)
ABC transporter substrate-binding protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000380E82F
tauA; ABC transporter substrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:CAI10595.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
SCNpilot_cont_300_bf_scaffold_28_curated_64
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65244..66467
DNA (1224bp) protein (408aa)
amidohydrolase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B783E4
amidohydrolase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
SCNpilot_cont_300_bf_scaffold_28_curated_65
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66470..66769
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7I1E0_9CLOT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
SCNpilot_cont_300_bf_scaffold_28_curated_66
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66773..68176
DNA (1404bp) protein (468aa)
Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster id=4600709 bin=GWC2_Methylomirabilis_70_16 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
FAD dependent oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
SCNpilot_cont_300_bf_scaffold_28_curated_67
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68173..69321
DNA (1149bp) protein (383aa)
soxB2; protein SoxB2 (EC:1.5.3.1); K00303 sarcosine oxidase, subunit beta [EC:1.5.3.1]
SoxB2 n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QJW8_DESAH
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
SCNpilot_cont_300_bf_scaffold_28_curated_68
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

69437..70243
DNA (807bp) protein (269aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PZV0_9FIRM
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component {ECO:0000313|EMBL:EKP94343.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
ABC transporter ATP-binding protein
SCNpilot_cont_300_bf_scaffold_28_curated_69
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70240..71073
DNA (834bp) protein (278aa)
taurine ABC transporter permease n=1 Tax=Azoarcus toluclasticus RepID=UPI00037D415E
binding-protein-dependent transporters inner membrane component; K02050 NitT/TauT family transport system permease protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
SCNpilot_cont_300_bf_scaffold_28_curated_70
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71139..72038)
DNA (900bp) protein (300aa)
LysR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUE3_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:EIK92833.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
transcriptional regulator, LysR family
SCNpilot_cont_300_bf_scaffold_28_curated_71
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72531..72941
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUE5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92835.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
SCNpilot_cont_300_bf_scaffold_28_curated_72
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73760..76969)
DNA (3210bp) protein (1070aa)
AcrB/AcrD/AcrF family cation efflux protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89I68_BRADU
AcrB/AcrD/AcrF family cation efflux protein {ECO:0000313|EMBL:BAC51036.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
AcrB/AcrD/AcrF family cation efflux protein rbh
SCNpilot_cont_300_bf_scaffold_28_curated_73
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76966..77955)
DNA (990bp) protein (330aa)
Bll5772 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89I67_BRADU
hypothetical protein rbh
Bll5772 protein {ECO:0000313|EMBL:BAC51037.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_cont_300_bf_scaffold_28_curated_74
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78064..78375)
DNA (312bp) protein (104aa)
Putative transcriptional regulatory protein, Ars family n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TRB5_9BRAD
Putative transcriptional regulatory protein, Ars family {ECO:0000313|EMBL:CCE09003.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
ArsR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_28_curated_75
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78500..79786
DNA (1287bp) protein (429aa)
Blr5774 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89I65_BRADU
Sulfide-quinone reductase {ECO:0000313|EMBL:BAR53739.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
sulfide-quinone reductase rbh
SCNpilot_cont_300_bf_scaffold_28_curated_76
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79783..80226
DNA (444bp) protein (148aa)
thioredoxin; K03672 thioredoxin 2 [EC:1.8.1.8]
Blr5775 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89I64_BRADU
Blr5775 protein {ECO:0000313|EMBL:BAC51040.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_cont_300_bf_scaffold_28_curated_77
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80254..80457
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G4J3_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL75680.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCNpilot_cont_300_bf_scaffold_28_curated_78
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80523..80912
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YQ78_9BRAD
Putative uncharacterized protein {ECO:0000313|EMBL:EHR04423.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_28_curated_79
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81004..81897
DNA (894bp) protein (298aa)
Putative enzyme with metallo-hydrolase/oxidoreductase domain (YcbL-like) n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RT59_9BRAD
Putative enzyme with metallo-hydrolase/oxidoreductase domain (YcbL-like) {ECO:0000313|EMBL:CCD85136.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
metallo-hydrolase/oxidoreductase domain-containing protein
SCNpilot_cont_300_bf_scaffold_28_curated_80
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81938..82636
DNA (699bp) protein (233aa)
peptidase M20D, amidohydrolase (EC:3.5.1.32); K01451 hippurate hydrolase [EC:3.5.1.32]
Peptidase M20D, amidohydrolase {ECO:0000313|EMBL:ABE64643.1}; EC=3.5.1.32 {ECO:0000313|EMBL:ABE64643.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Peptidase M20D, amidohydrolase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGK4_NITHX
SCNpilot_cont_300_bf_scaffold_28_curated_81
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82761..83420
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NP83_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30941.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_28_curated_82
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84381..84974
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PL29_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41479.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_300_bf_scaffold_28_curated_83
unknown

Not on your lists

84971..85129
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_28_curated_84
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85669..86526)
DNA (858bp) protein (286aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BH56_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06893.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_300_bf_scaffold_28_curated_85
unknown

Not on your lists

comp(86586..86843)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_28_curated_86
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87639..87977)
DNA (339bp) protein (113aa)
Plasmid stabilization system n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q215Q0_RHOPB
plasmid stabilization system protein
Plasmid stabilization system {ECO:0000313|EMBL:ABD87886.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_300_bf_scaffold_28_curated_87
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87977..88237)
DNA (261bp) protein (87aa)
CopG-like DNA-binding n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q215Q1_RHOPB
CopG-like DNA-binding
CopG-like DNA-binding {ECO:0000313|EMBL:ABD87885.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_300_bf_scaffold_28_curated_88
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88310..89146)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NIK5_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF20930.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_28_curated_89
unknown

Not on your lists

89495..89767
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_28_curated_90
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90381..90671
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YHL3_9BRAD
Putative uncharacterized protein {ECO:0000313|EMBL:EHR03936.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
hypothetical protein
Displaying items 61-90 of 366 in total

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