name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_300_bf_scaffold_28_curated_31
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33732..34544)
|
ABC transporter, phosphonate transport permease PhnE n=2 Tax=Oligotropha carboxidovorans RepID=B6JJH3_OLICO
phnE; ABC transporter, phosphonate transport permease PhnE; K02042 phosphonate transport system permease protein
ABC transporter, phosphonate transport permease PhnE {ECO:0000313|EMBL:AEI05392.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_32
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34609..35484)
|
Phosphonate ABC transporter, periplasmic phosphonate-binding protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8Q0_9BRAD
Phosphate-import protein PhnD {ECO:0000313|EMBL:CEG09067.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
phnD; phosphonate ABC transporter protein PhnD; K02044 phosphonate transport system substrate-binding protein
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_33
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(35557..37128)
|
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BKZ5_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05390.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_34
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(37220..37759)
|
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BKZ5_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05390.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_35
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(37877..38239)
|
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri NF13 RepID=M2VG54_PSEST
DsrE/DsrF-like family protein {ECO:0000313|EMBL:KCB36046.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_36
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(38325..38567)
|
SirA domain protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJH7_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05388.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_37
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(39015..40151)
|
dihydroorotase; K01465 dihydroorotase [EC:3.5.2.3]
Dihydroorotase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H7Z2_9BRAD
Dihydroorotase {ECO:0000313|EMBL:ERF85962.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_38
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(40198..41328)
|
Low-specificity D-threonine aldolase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UDS7_9RHOB
Low-specificity D-threonine aldolase {ECO:0000313|EMBL:EJW11144.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
alanine racemase domain-containing protein
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_39
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(41325..43658)
|
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein {ECO:0000313|EMBL:ADU51591.1}; EC=1.17.1.4 {ECO:0000313|EMBL:ADU51591.1};; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
Xanthine dehydrogenase, molybdenum binding subunit apoprotein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGD9_THEM7
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_40
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(43655..44494)
|
cutM; carbon monoxide dehydrogenase (EC:1.2.99.2); K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2]
CutM protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89PE8_BRADU
CutM protein {ECO:0000313|EMBL:BAC48799.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_41
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(44491..44946)
|
carbon-monoxide dehydrogenase (acceptor) (EC:1.2.99.2); K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
(2Fe-2S)-binding domain protein n=2 Tax=Sulfobacillus acidophilus RepID=F8IBX2_SULAT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_42
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(44943..45965)
|
5,10-methylenetetrahydromethanopterin reductase (EC:1.5.99.11); K00320 coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase [EC:1.5.99.11]
Putative 5,10-methylenetetrahydromethanopterin reductase id=3040432 bin=GWC2_Methylomirabilis_70_16 species=Pseudoflavonifractor capillosus genus=Pseudoflavonifractor taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_43
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(45967..46683)
|
Putative branched-chain amino acid ABC transporter, ATP-binding protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IPW5_BORPD
branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein
Putative branched-chain amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CAP42992.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_44
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(46670..48490)
|
ABC transporter, ATP-binding protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WW18_9DELT
branched-chain amino acid ABC transporter permease/ATP-binding protein
Tax=BJP_IG2069_Desfulfarculales_53_13
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_45
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria
|
Not on your lists |
comp(48494..49357)
|
Inner-membrane translocator id=2920417 bin=GWC2_Chloroflexi_49_37 species=unknown genus=Acidiphilium taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
Tax=GWC2_Chloroflexi_49_37_curated
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_46 |
Not on your lists |
comp(49390..50556)
|
Extracellular ligand-binding receptor n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q137Z6_RHOPS
Uncharacterized protein {ECO:0000313|EMBL:KKL61689.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
extracellular ligand-binding receptor
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_47
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria
|
Not on your lists |
comp(50625..51095)
|
Tax=RBG_16_RIF_CHLX_72_14_curated
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_48
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(51109..51759)
|
Transcriptional regulator, GntR family n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C2R6_HYPNA
GntR family transcriptional regulator {ECO:0000313|EMBL:KCZ98844.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorpha PS728.;"
GntR family transcriptional regulator
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_49
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
51905..53311
|
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Amidase id=4599606 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_50
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
53313..54581
|
Amidase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8A3_9BRAD
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000313|EMBL:CEG09074.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
amidase
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_51
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(54711..55055)
|
Uncharacterized protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CEZ6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIZ82557.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_52
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
55230..55445
|
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037F3799
Uncharacterized protein {ECO:0000313|EMBL:KIZ39390.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_53
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
55496..55846
|
Blr4641 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89LA5_BRADU
hypothetical protein
Blr4641 protein {ECO:0000313|EMBL:BAC49906.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_54
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(55944..57386)
|
glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P1P0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36512.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_55
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(57417..58775)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDT0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36513.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Rieske (2Fe-2S) iron-sulfur domain
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_56
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
59073..59393
|
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002FBE510
Uncharacterized protein {ECO:0000313|EMBL:EKS36514.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ferredoxin; K04755 ferredoxin, 2Fe-2S
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_57
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
59390..60631
|
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P816_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35760.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_58
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
60878..61492
|
PcaR/PcaU/PobR family beta-ketoadipate pathway transcriptional regulator n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4U3_9BRAD
PcaR/PcaU/PobR family beta-ketoadipate pathway transcriptional regulator {ECO:0000313|EMBL:EKS36516.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
IclR family transcriptional regulator; K02624 IclR family transcriptional regulator, pca regulon regulatory protein
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_59
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(61489..61833)
|
5-carboxymethyl-2-hydroxymuconate delta-isomerase; K01826 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000368B2B3
Uncharacterized protein {ECO:0000313|EMBL:EKS36517.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
SCNpilot_cont_300_bf_scaffold_28_curated_60
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
62036..63052
|
Cobalamin synthesis protein P47K n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ERE9_METSB
cobalamin synthesis protein P47K
Cobalamin synthesis protein P47K {ECO:0000313|EMBL:ACK50333.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
|