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SCNpilot_cont_300_bf_scaffold_28_curated_59

Organism: scnpilot_dereplicated_Rhizobiales_3

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38
Location: comp(61489..61833)

Top 3 Functional Annotations

Value Algorithm Source
5-carboxymethyl-2-hydroxymuconate delta-isomerase; K01826 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10] similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 114.0
  • Bit_score: 111
  • Evalue 2.40e-22
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000368B2B3 similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 112.0
  • Bit_score: 165
  • Evalue 3.40e-38
Uncharacterized protein {ECO:0000313|EMBL:EKS36517.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 114.0
  • Bit_score: 163
  • Evalue 1.80e-37

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 345
TTGCCCCATATCGTCTGCCACTATTCGGCCGGTCAAGAGATGCCGCCGGTTCGCACCATTCTGAAGGAACTTCATCGTATCGCGGCTTCGACCGGCGTGGTGCGGGCCGAAGACCTCAAGAGTCGGGCCCAGGCATTCAGCGATTACCTGATTGCTGGAGAAGAAAGGTCGTTCTTTCACGTGTCTTTGTACTTGCTTGCCGGTAGAAGCGGACCGCAAAAAGAACGGCTAAGCGTAGAATTGAGAGCTGGGCTGGTCGCGTTGTTGCCAGGTACGCACAGCATCAGCGTCGATATTCGGGATATGGATCCCGACGCGTACAAGAAGCGTCTGTTGCCAACCTAA
PROTEIN sequence
Length: 115
LPHIVCHYSAGQEMPPVRTILKELHRIAASTGVVRAEDLKSRAQAFSDYLIAGEERSFFHVSLYLLAGRSGPQKERLSVELRAGLVALLPGTHSISVDIRDMDPDAYKKRLLPT*