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SCNpilot_cont_500_bf_scaffold_1068_curated

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1068_curated_1
unknown

Not on your lists

comp(1..105)
DNA (105bp) protein (35aa)
Elongation factor Tu n=53 Tax=Rhizobiales RepID=C4WKE2_9RHIZ
SCNpilot_cont_500_bf_scaffold_1068_curated_trna_3
unknown

Not on your lists

comp(205..275)
DNA (71bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_1068_curated_trna_2
unknown

Not on your lists

comp(303..384)
DNA (82bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_1068_curated_2
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

522..1487
DNA (966bp) protein (322aa)
RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
RNA methyltransferase, TrmH family, group 3 n=2 Tax=Ochrobactrum intermedium RepID=C4WKE3_9RHIZ
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EEQ95974.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
SCNpilot_cont_500_bf_scaffold_1068_curated_3
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1522..1956)
DNA (435bp) protein (145aa)
inosine-5-monophosphate dehydrogenase n=1 Tax=Ochrobactrum anthropi RepID=UPI0002883504
Inosine-5-monophosphate dehydrogenase {ECO:0000313|EMBL:EXL07960.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1068_curated_4
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2100..2825)
DNA (726bp) protein (242aa)
Rhomboid family protein n=2 Tax=Ochrobactrum intermedium RepID=C4WKE5_9RHIZ
Rhomboid family protein {ECO:0000313|EMBL:ELT51180.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
rhomboid family protein
SCNpilot_cont_500_bf_scaffold_1068_curated_5
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3245..3883
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X098_OCHA4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS14652.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_500_bf_scaffold_1068_curated_6
Brucella sp. 83/13, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4090..4701
DNA (612bp) protein (204aa)
Transglutaminase cysteine peptidase BTLCP n=2 Tax=Brucella RepID=D1CYL0_9RHIZ
Transglutaminase cysteine peptidase BTLCP {ECO:0000313|EMBL:EEZ33164.1}; TaxID=520449 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. 83/13.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1068_curated_7
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4720..5247)
DNA (528bp) protein (176aa)
Ferripyochelin-binding protein, hypothetical n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X095_OCHA4
Acetyltransferase {ECO:0000313|EMBL:EXL07965.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
ferripyochelin-binding protein
SCNpilot_cont_500_bf_scaffold_1068_curated_8
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5459..5665)
DNA (207bp) protein (69aa)
Uncharacterized protein n=4 Tax=Ochrobactrum RepID=M5JSU7_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELT51173.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
SCNpilot_cont_500_bf_scaffold_1068_curated_9
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5757..6602)
DNA (846bp) protein (282aa)
Serine O-acetyltransferase {ECO:0000313|EMBL:EEQ95984.1}; EC=3.5.3.23 {ECO:0000313|EMBL:EEQ95984.1};; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
serine O-acetyltransferase; K00640 serine O-acetyltransferase [EC:2.3.1.30]
Serine O-acetyltransferase n=3 Tax=Ochrobactrum RepID=C4WKF3_9RHIZ
SCNpilot_cont_500_bf_scaffold_1068_curated_10
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6667..7437)
DNA (771bp) protein (257aa)
Alpha/beta hydrolase n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1X318_9RHIZ
Alpha/beta hydrolase {ECO:0000313|EMBL:ERI15204.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
alpha/beta hydrolase fold protein
SCNpilot_cont_500_bf_scaffold_1068_curated_11
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7563..8036)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X086_OCHA4
hypothetical protein; K09005 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXL07972.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
SCNpilot_cont_500_bf_scaffold_1068_curated_12
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8132..9361)
DNA (1230bp) protein (410aa)
UPI0003CDDCA2 related cluster n=1 Tax=unknown RepID=UPI0003CDDCA2
Major facilitator superfamily protein {ECO:0000313|EMBL:CDX29862.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
major facilitator superfamily protein
SCNpilot_cont_500_bf_scaffold_1068_curated_13
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9489..10070)
DNA (582bp) protein (194aa)
Cold shock-like protein cspG n=3 Tax=Ochrobactrum intermedium RepID=C4WKF6_9RHIZ
Cold-shock protein {ECO:0000313|EMBL:ERM02823.1}; TaxID=1337887 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium 229E.;"
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family)
SCNpilot_cont_500_bf_scaffold_1068_curated_14
Brucella sp. BO2, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10404..10844
DNA (441bp) protein (147aa)
Lactoylglutathione lyase {ECO:0000313|EMBL:EFM60976.1}; EC=4.4.1.5 {ECO:0000313|EMBL:EFM60976.1};; TaxID=693750 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. BO2.;"
gloA; lactoylglutathione lyase; K01759 lactoylglutathione lyase [EC:4.4.1.5]
Lactoylglutathione lyase n=1 Tax=Brucella sp. BO2 RepID=E2PJ77_9RHIZ
SCNpilot_cont_500_bf_scaffold_1068_curated_15
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10890..11906)
DNA (1017bp) protein (339aa)
membrane protein n=1 Tax=Ochrobactrum anthropi RepID=UPI000289684E
Membrane protein {ECO:0000313|EMBL:EXL07975.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
import inner membrane translocase subunit Tim44
SCNpilot_cont_500_bf_scaffold_1068_curated_16
Brucella inopinata, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12014..13798)
DNA (1785bp) protein (595aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EFM57185.1}; EC=3.1.-.- {ECO:0000313|EMBL:EFM57185.1};; TaxID=470735 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella inopinata BO1.;"
recJ; single-stranded-DNA-specific exonuclease RecJ (EC:3.1.-.-); K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Brucella inopinata BO1 RepID=E0DLE4_9RHIZ
SCNpilot_cont_500_bf_scaffold_1068_curated_17
Brucella suis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13914..14900)
DNA (987bp) protein (329aa)
fructose-1,6-bisphosphatase; K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11]
Fructose-1,6-bisphosphatase n=183 Tax=Brucella RepID=B2S6B2_BRUA1
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=1160233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella suis 92/29.;"
SCNpilot_cont_500_bf_scaffold_1068_curated_18
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14980..16299)
DNA (1320bp) protein (440aa)
homoserine dehydrogenase; K00003 homoserine dehydrogenase [EC:1.1.1.3]
Homoserine dehydrogenase n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X079_OCHA4
Homoserine dehydrogenase {ECO:0000313|EMBL:EXL07981.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
SCNpilot_cont_500_bf_scaffold_1068_curated_19
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16396..17616)
DNA (1221bp) protein (407aa)
aminotransferase; K14261 alanine-synthesizing transaminase [EC:2.6.1.-]
Aminotransferase class I and II n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X078_OCHA4
Aminotransferase {ECO:0000313|EMBL:EXL07982.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
SCNpilot_cont_500_bf_scaffold_1068_curated_20
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17742..18098)
DNA (357bp) protein (119aa)
Uncharacterized protein n=3 Tax=Ochrobactrum RepID=M5JSU0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EEQ95997.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1068_curated_21
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18467..19483
DNA (1017bp) protein (339aa)
Titin n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WKH1_9RHIZ
peptidase M15A
Titin {ECO:0000313|EMBL:EEQ95998.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
SCNpilot_cont_500_bf_scaffold_1068_curated_trna_1
unknown

Not on your lists

19694..19765
DNA (72bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_1068_curated_22
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20041..21480
DNA (1440bp) protein (480aa)
glcD; glycolate oxidase subunit; K00104 glycolate oxidase [EC:1.1.3.15]
FAD/FMN-dependent dehydrogenase n=1 Tax=Rhizobium sp. CF142 RepID=J1SSJ0_9RHIZ
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:EJJ28233.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
SCNpilot_cont_500_bf_scaffold_1068_curated_23
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21477..22679
DNA (1203bp) protein (401aa)
Glycolate oxidase subunit E protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9J9W5_AGRRK
glcE; glycolate oxidase subunit E protein; K11472 glycolate oxidase FAD binding subunit
2-hydroxy-acid oxidase {ECO:0000313|EMBL:KEA05359.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
SCNpilot_cont_500_bf_scaffold_1068_curated_24
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22683..23987
DNA (1305bp) protein (435aa)
glcF; glycolate oxidase, iron-sulfur subunit (EC:1.1.3.15); K11473 glycolate oxidase iron-sulfur subunit
Fe-S oxidoreductase n=1 Tax=Rhizobium sp. CF080 RepID=J2SEA6_9RHIZ
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCNpilot_cont_500_bf_scaffold_1068_curated_25
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24014..24298
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X075_OCHA4
hypothetical protein; K09956 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEQ95999.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
SCNpilot_cont_500_bf_scaffold_1068_curated_26
Brucella inopinata, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24341..25039
DNA (699bp) protein (233aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Brucella inopinata BO1 RepID=E0DLF5_9RHIZ
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=470735 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella inopinata BO1.;"
sfsA; sugar fermentation stimulation protein A; K06206 sugar fermentation stimulation protein A
SCNpilot_cont_500_bf_scaffold_1068_curated_27
Brucella sp. BO2, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25080..25907
DNA (828bp) protein (276aa)
map; methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18]
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=693750 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. BO2.;"
Methionine aminopeptidase n=2 Tax=Brucella RepID=E0DLF6_9RHIZ
Displaying items 1-30 of 31 in total

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