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SCNpilot_cont_500_bf_scaffold_17_curated

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Displaying items 1-30 of 957 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_17_curated_1
Brucella sp. 83/13, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..997
DNA (996bp) protein (332aa)
Porin omp2b n=3 Tax=Brucella RepID=OMP2B_BRUSS
Omp2b porin {ECO:0000313|EMBL:EEZ32616.1}; TaxID=520449 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. 83/13.;"
ropA; Outer membrane protein IIIA
SCNpilot_cont_500_bf_scaffold_17_curated_2
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1277..2200
DNA (924bp) protein (308aa)
Integrase n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1WVR8_9RHIZ
Integrase {ECO:0000313|EMBL:ERI12714.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
phage integrase family protein
SCNpilot_cont_500_bf_scaffold_17_curated_3
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2334..3464
DNA (1131bp) protein (377aa)
histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
Aminotransferase class I and II n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X2A7_OCHA4
Aminotransferase class I and II {ECO:0000313|EMBL:ABS15361.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_500_bf_scaffold_17_curated_4
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3489..3863
DNA (375bp) protein (125aa)
oxidoreductase n=1 Tax=Ochrobactrum anthropi RepID=UPI0002894BB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS15362.1}; Flags: Precursor;; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_500_bf_scaffold_17_curated_5
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4006..4650)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Brucella suis 94/11 RepID=N7Q942_BRUSS
Uncharacterized protein {ECO:0000313|EMBL:EEQ95307.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
Antifreeze protein, type I
SCNpilot_cont_500_bf_scaffold_17_curated_6
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5056..5313)
DNA (258bp) protein (86aa)
Uncharacterized protein n=4 Tax=Ochrobactrum RepID=M5JKZ3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ERM00511.1}; TaxID=1337887 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium 229E.;"
hypothetical protein; K07126
SCNpilot_cont_500_bf_scaffold_17_curated_7
Brucella abortus, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5851..6198
DNA (348bp) protein (116aa)
SN-glycerol-3-phosphate transport ATP-binding protein ugpC n=1 Tax=Brucella inopinata BO1 RepID=E0DPD7_9RHIZ
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEX61324.1}; TaxID=520454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella abortus bv. 6 str. 870.;"
SCNpilot_cont_500_bf_scaffold_17_curated_8
Brucella suis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6262..6972)
DNA (711bp) protein (237aa)
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase domain protein n=30 Tax=Brucella RepID=B0CKV5_BRUSI
Glutathione S-transferase domain-containing protein {ECO:0000313|EMBL:EEY29638.1}; TaxID=520489 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella suis bv. 5 str. 513.;"
SCNpilot_cont_500_bf_scaffold_17_curated_9
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7461..8984
DNA (1524bp) protein (508aa)
AMP nucleosidase; K01241 AMP nucleosidase [EC:3.2.2.4]
AMP nucleosidase {ECO:0000256|HAMAP-Rule:MF_01932}; EC=3.2.2.4 {ECO:0000256|HAMAP-Rule:MF_01932};; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
AMP nucleosidase n=1 Tax=Ochrobactrum anthropi RepID=UPI000289206B
SCNpilot_cont_500_bf_scaffold_17_curated_10
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9099..10112
DNA (1014bp) protein (338aa)
endonuclease n=1 Tax=Ochrobactrum anthropi RepID=UPI00028A2F23
AP endonuclease {ECO:0000313|EMBL:EXL06955.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
endonuclease/exonuclease/phosphatase
SCNpilot_cont_500_bf_scaffold_17_curated_11
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10137..11843)
DNA (1707bp) protein (569aa)
electron-transferring-flavoprotein dehydrogenase; K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
Electron-transferring-flavoprotein dehydrogenase n=2 Tax=Ochrobactrum intermedium RepID=C4WE21_9RHIZ
Electron-transferring-flavoprotein dehydrogenase {ECO:0000313|EMBL:ELT47297.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
SCNpilot_cont_500_bf_scaffold_17_curated_12
Brucella microti, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12184..13059
DNA (876bp) protein (292aa)
uracil-DNA glycosylase, family 4; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7]
Uracil-DNA glycosylase, family 4 n=1 Tax=Brucella melitensis F1/06 B10 RepID=N8AT30_BRUML
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:ACU47618.1}; TaxID=568815 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella microti (strain CCM 4915).;"
SCNpilot_cont_500_bf_scaffold_17_curated_13
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13369..14616
DNA (1248bp) protein (416aa)
MFS transporter n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1XCQ5_9RHIZ
MFS transporter {ECO:0000313|EMBL:ERI12730.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
major facilitator transporter
SCNpilot_cont_500_bf_scaffold_17_curated_14
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14803..17469
DNA (2667bp) protein (889aa)
Aminopeptidase N {ECO:0000313|EMBL:EEQ95294.1}; EC=4.2.3.28 {ECO:0000313|EMBL:EEQ95294.1};; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
pepN; aminopeptidase N; K01256 aminopeptidase N [EC:3.4.11.2]
aminopeptidase N n=1 Tax=Ochrobactrum anthropi RepID=UPI000288D622
SCNpilot_cont_500_bf_scaffold_17_curated_15
bacterium YEK0313, Bacteria

Not on your lists

17547..18314
DNA (768bp) protein (256aa)
methyltransferase (EC:2.1.1.-)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4P9N4_9CAUL
Malonyl-[acyl-carrier protein] O-methyltransferase {ECO:0000313|EMBL:CEJ12225.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_500_bf_scaffold_17_curated_16
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18637..21042
DNA (2406bp) protein (802aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
multi-sensor signal transduction histidine kinase; K07716 two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
Multi-sensor signal transduction histidine kinase n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X2C1_OCHA4
SCNpilot_cont_500_bf_scaffold_17_curated_17
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21043..24012)
DNA (2970bp) protein (990aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42]
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JL96_9RHIZ
SCNpilot_cont_500_bf_scaffold_17_curated_18
Brucella inopinata, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24032..25438)
DNA (1407bp) protein (469aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=470735 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella inopinata BO1.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Brucella inopinata BO1 RepID=E0DPC3_9RHIZ
sensor histidine kinase
SCNpilot_cont_500_bf_scaffold_17_curated_19
Brucella canis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25435..26181)
DNA (747bp) protein (249aa)
DNA-binding response regulator n=200 Tax=Brucella PF8_BRUO2">RepID=A5VPF8_BRUO2
DNA-binding response regulator
Transcriptional activator protein copR {ECO:0000313|EMBL:ABX61703.1}; TaxID=483179 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella canis (strain ATCC 23365 / NCTC 10854).;"
SCNpilot_cont_500_bf_scaffold_17_curated_20
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26266..27831)
DNA (1566bp) protein (522aa)
serine peptidase n=1 Tax=Ochrobactrum anthropi RepID=UPI0002887292
Serine peptidase {ECO:0000313|EMBL:EXL06965.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
protease Do
SCNpilot_cont_500_bf_scaffold_17_curated_21
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28013..28498)
DNA (486bp) protein (162aa)
Cytochrome c-type biogenesis protein ccl2 n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WE12_9RHIZ
Cytochrome c-type biogenesis protein ccl2 {ECO:0000313|EMBL:EEQ95289.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
Cytochrome C biogenesis protein; K02200 cytochrome c-type biogenesis protein CcmH
SCNpilot_cont_500_bf_scaffold_17_curated_22
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28495..30495)
DNA (2001bp) protein (667aa)
Cytochrome c-type biogenesis protein CcmF n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WE11_9RHIZ
Cytochrome c-type biogenesis protein CcmF {ECO:0000313|EMBL:EEQ95288.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
ccmF; cytochrome c-type biogenesis protein CcmF; K02198 cytochrome c-type biogenesis protein CcmF
SCNpilot_cont_500_bf_scaffold_17_curated_23
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30492..30989)
DNA (498bp) protein (166aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WE10_9RHIZ
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
cytochrome c-type biogenesis protein CcmE; K02197 cytochrome c-type biogenesis protein CcmE
SCNpilot_cont_500_bf_scaffold_17_curated_24
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30986..32110)
DNA (1125bp) protein (375aa)
Cytochrome c-type biogenesis protein, putative n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X2C9_OCHA4
cytochrome c-type biogenesis protein; K02200 cytochrome c-type biogenesis protein CcmH
Cytochrome C {ECO:0000313|EMBL:EXL06969.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
SCNpilot_cont_500_bf_scaffold_17_curated_25
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32203..32673)
DNA (471bp) protein (157aa)
Outer membrane lipoprotein-related protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X2D0_OCHA4
outer membrane lipoprotein-like protein
Outer membrane lipoprotein-related protein {ECO:0000313|EMBL:ABS15384.1}; Flags: Precursor;; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_500_bf_scaffold_17_curated_26
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32912..34219)
DNA (1308bp) protein (436aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
histidine kinase n=1 Tax=Ochrobactrum anthropi RepID=UPI000288F7F3
histidine kinase
SCNpilot_cont_500_bf_scaffold_17_curated_27
Brucella sp. BO2, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34294..34983)
DNA (690bp) protein (230aa)
DNA-binding response regulator n=44 Tax=Brucella PF0_BRUO2">RepID=A5VPF0_BRUO2
DNA-binding response regulator
Two component transcriptional regulator {ECO:0000313|EMBL:EFM59144.1}; TaxID=693750 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. BO2.;"
SCNpilot_cont_500_bf_scaffold_17_curated_28
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35100..35399)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KJ86_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EMG54919.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_17_curated_29
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35501..35707)
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Ochrobactrum intermedium RepID=U4V6R1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ERM01690.1}; TaxID=1337887 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium 229E.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_17_curated_30
Brucella microti, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35905..39699)
DNA (3795bp) protein (1265aa)
Phage host specificity protein n=1 Tax=Brucella microti (strain CCM 4915) RepID=C7LAR4_BRUMC
phage host specificity protein
Phage host specificity protein {ECO:0000313|EMBL:ACU47599.1}; TaxID=568815 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella microti (strain CCM 4915).;"
Displaying items 1-30 of 957 in total

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