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SCNpilot_cont_500_bf_scaffold_850_curated_6

Organism: scnpilot_dereplicated_Rhizobiales_6

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 2
Location: comp(5084..6001)

Top 3 Functional Annotations

Value Algorithm Source
branched-chain amino acid transporter permease subunit LivH n=1 Tax=Rhizobium leguminosarum RepID=UPI00037F5AE2 similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 305.0
  • Bit_score: 554
  • Evalue 9.10e-155
Branched-chain amino acid transporter permease subunit LivH {ECO:0000313|EMBL:EPR10877.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 305.0
  • Bit_score: 538
  • Evalue 5.60e-150
livH; High-affinity branched-chain amino acid transport system permease protein livH; K01997 branched-chain amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 305.0
  • Bit_score: 517
  • Evalue 3.90e-144

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGGACTTCTATATTCTGGCCCAGCAGTTGATAAACGGGATCACGCTGGGCACCATCTACGGACTGATCGCGGTCGGCTACACCATGGTCTATGGCGTGATCCGCATGATCAATTTCGCCCATGGCGACGTCTACATGGTCTCGGCCTATATCGCGGCGATCACGCTGGCGGTGCTGGGCTACTTCGGCGTCCATTCGGTACCGTTCGCGCTGATCTCGGTGCTGGTCGTCACCTGCGCCATCACCGCCGTCTACGGCTGGACCATCGAGCGCGTGGCCTACCGGCCGCTGCGCGGCTCCACCCAACTCGCGCCGCTGATCTCGGCCATCGGCATCTCGCTGATGCTGCAAAGCTATGTGCAACTCGGTCAGGGCGCGCGCGATCAAGGCGTTCCAAGCCTCATCGAGGGCGCGTTCCGCATCGGCAACGCGCAGCATTTCGCGCAGATCACCTATATGCAGACCGTGATCCTTTTCGCCGCGCTGGTGGCGATGGGCATTCTCACCTATGTGATCGGCCATACGCGCATCGGCCGCGAATGCCGCGCGACCCAGCAGAACATCCGCATTTCCGCGATTCTCGGCGTCAACACCGACCGAACCATCTCGACGGTCTTCGTCATCGGCGCGGCCACCGCGGCGGTGGGCGGCACGCTCGTCACCTTCGACTACGGCTCGTTCAACTTTTTCATCGGCTTCGTGATGGGTCTCAAGGCCTTCACGGCGGCCGTGCTGGGCGGCATCGGCTCGCTGCCGGGGGCGGTGCTGGGCGGCGTGCTGCTCGGCCTCACCGAAGCCCTCTTCGCCGGCTATGTCAGCACGGACTACAAGGACGTCTTCGCCTTCGCCCTTCTCATCGTCCTGCTGTTCTTCCGGCCCTATGGCCTGCTCGGCCGTCCCGAAATCCAGAAAGTCTAG
PROTEIN sequence
Length: 306
MDFYILAQQLINGITLGTIYGLIAVGYTMVYGVIRMINFAHGDVYMVSAYIAAITLAVLGYFGVHSVPFALISVLVVTCAITAVYGWTIERVAYRPLRGSTQLAPLISAIGISLMLQSYVQLGQGARDQGVPSLIEGAFRIGNAQHFAQITYMQTVILFAALVAMGILTYVIGHTRIGRECRATQQNIRISAILGVNTDRTISTVFVIGAATAAVGGTLVTFDYGSFNFFIGFVMGLKAFTAAVLGGIGSLPGAVLGGVLLGLTEALFAGYVSTDYKDVFAFALLIVLLFFRPYGLLGRPEIQKV*