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SCNpilot_expt_1000_bf_scaffold_6614_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6614_curated_1
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..316
DNA (315bp) protein (105aa)
transcriptional regulator n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003610263
Cupin domain protein {ECO:0000313|EMBL:KCB37889.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6614_curated_2
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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680..1576
DNA (897bp) protein (299aa)
Bacterial luciferase family protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SL60_9RHOB
Luciferase {ECO:0000313|EMBL:KIC17335.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG-Vp.;"
putative oxidoreductase
SCNpilot_expt_1000_bf_scaffold_6614_curated_3
Rhodococcus sp. Chr-9, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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1589..2854
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI0003639525
Amidohydrolase {ECO:0000313|EMBL:KHJ74471.1}; TaxID=713612 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. Chr-9.;"
amidohydrolase
SCNpilot_expt_1000_bf_scaffold_6614_curated_4
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3015..3905
DNA (891bp) protein (297aa)
Regulatory protein, LysR:LysR, substrate-binding n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U0N2_9PROT
Regulatory protein, LysR:LysR, substrate-binding {ECO:0000313|EMBL:CAM76439.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_6614_curated_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4011..4562)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00037A9606
Uncharacterized protein {ECO:0000313|EMBL:EJB06776.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6614_curated_6
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5694..6677
DNA (984bp) protein (328aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhizobium sp. CF122 RepID=J3BQD8_9RHIZ
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJL55379.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
diguanylate cyclase
SCNpilot_expt_1000_bf_scaffold_6614_curated_7
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6840..8042)
DNA (1203bp) protein (401aa)
HipA protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1]
Capsule biosynthesis enzymes related protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0CSY8_RHILT
Capsule biosynthesis enzymes related protein {ECO:0000313|EMBL:EJC82915.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
SCNpilot_expt_1000_bf_scaffold_6614_curated_8
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8039..8338)
DNA (300bp) protein (100aa)
Helix-turn-helix protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0WAX5_RHILT
Helix-turn-helix protein {ECO:0000313|EMBL:EJC82916.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
helix-turn-helix domain-containing protein
SCNpilot_expt_1000_bf_scaffold_6614_curated_9
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8727..9935
DNA (1209bp) protein (403aa)
chromosome partitioning protein ParA n=1 Tax=Rhizobium leguminosarum RepID=UPI000377C1F0
plasmid partitioning protein RepA
Plasmid partitioning protein RepA {ECO:0000313|EMBL:ACS60811.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
SCNpilot_expt_1000_bf_scaffold_6614_curated_10
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10005..10730
DNA (726bp) protein (242aa)
Putative replication protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M8W3_RHIL3
repB; putative replication protein; K03497 chromosome partitioning protein, ParB family
RepB {ECO:0000313|EMBL:AIU45766.1}; TaxID=387 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae.;"
Displaying 10 items

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