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SCNpilot_expt_1000_bf_scaffold_14837_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_14837_curated_1
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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108..866
DNA (759bp) protein (253aa)
Replication protein A n=2 Tax=Rhizobium radiobacter RepID=B9JQR1_AGRRK
Uncharacterized protein {ECO:0000313|EMBL:GAK73407.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
repA; replication protein A
SCNpilot_expt_1000_bf_scaffold_14837_curated_2
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1257..1883
DNA (627bp) protein (209aa)
Resolvase domain protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J738_POLGS
TniR protein {ECO:0000313|EMBL:CDN96444.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
Resolvase domain protein
SCNpilot_expt_1000_bf_scaffold_14837_curated_3
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2107..2772
DNA (666bp) protein (222aa)
protein parA n=1 Tax=Rhizobium radiobacter RepID=UPI0003650CA2
Protein parA {ECO:0000313|EMBL:EPR19725.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
chromosome partitioning ATPase; K03496 chromosome partitioning protein
SCNpilot_expt_1000_bf_scaffold_14837_curated_4
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2769..3056
DNA (288bp) protein (96aa)
Partition protein ParB n=1 Tax=Rhizobium radiobacter RepID=Q9LAC2_RHIRD
Partition protein ParB {ECO:0000313|EMBL:AAF45024.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
partition protein ParB
SCNpilot_expt_1000_bf_scaffold_14837_curated_5
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3063..3407
DNA (345bp) protein (115aa)
Nuclease n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JN61_9RHIZ
Nuclease {ECO:0000313|EMBL:ELT48550.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
yci; nuclease
SCNpilot_expt_1000_bf_scaffold_14837_curated_6
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3467..3850)
DNA (384bp) protein (128aa)
Uncharacterized protein {ECO:0000313|EMBL:KDR87716.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;"
SCNpilot_expt_1000_bf_scaffold_14837_curated_7
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3837..4286)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HLS1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EPE99549.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
SCNpilot_expt_1000_bf_scaffold_14837_curated_8
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4488..4982)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P1B8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF43959.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_14837_curated_9
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4936..5562)
DNA (627bp) protein (209aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;"
UPI0003CE3FC6 related cluster n=1 Tax=unknown RepID=UPI0003CE3FC6
glycoside hydrolase family protein
SCNpilot_expt_1000_bf_scaffold_14837_curated_10
unknown

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5815..5904
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 10 items

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